GalaxyE_docker_galaxy-stable
Derived from bgruening/docker-galaxy-stable https://github.com/bgruening/docker-galaxy-stable.
The image built with GalaxyE_tool_list.yml will help to do final tests on developped tools.
How to run :
In the repo :
$ docker build -t galaxy-e .
$ docker run -p 8080:80 galaxy-e
Open your web browser on http://localhost:8080
Categories and tool list to test :
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Upload
- Get species occurences data : spocc::occ
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Rdata files manipulation
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Rdata reader
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Rdata parser
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VigieChiro
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IdCorrect2ndlayer
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BilanEnrichi
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IdValid
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Sqlite tadarida to tabular
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Tadarida-c
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Tadarida-d
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RegionalGAM
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Expected temporal trend
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Abundance index
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Linear regression
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Trend
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Linear regression ajusted
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Autocorrection residus
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Fligth curve
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SIG
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GdalWarp
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GdalInfo
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GdalAddo
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GdalTranslate
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OgrInfo
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GdalMerge
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GdalBuildVRT
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NetcdfRead
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NetcdfMetadataInfo
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Convert format
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Tabular2csv
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Csv2tabular
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Need some work / Not sure yet
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Taxref
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Langue2Boeuf #No docmentation nor help now
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Worldclim climatic data #Ok without the geotif save option. What's wrong with r-rgdal in conda ? need few more tests
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STOCeps
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STOCeps2
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