AlaaALatif / tcrnet

A software toolkit for processing and analyzing T-Cell Receptor (TCR) data.

tcrnet: T-Cell Receptor Network Analysis

A software toolkit for processing and analyzing T-Cell Receptor (TCR) data.

Prerequisites

• familiarity with Python programming language
  • must have python>=3.9 installed in your machine
• familiarity with T-Cell Receptor (TCR) immune repertoire analysis

Install

• clone the github repository using git clone
• enter the code directory

cd tcrnet/

• install the toolkit

pip3 install -e .

• open a Jupyter notebook (e.g. notebooks/tcrnet_10x_tutorial.ipynb) and start exploring your data!

CITATION: E-MTAB-/357/E-MTAB-9357