Agricultural Data Processing Pipeline's repositories
transformer-soilmask
Masks soil from images (formerly extractor-stereo-rgb/rgbmask in TERRAREF project)
issues-and-projects
Repository for issues and projects
drone-makeflow
Makeflow files for running drone workflows
Organization-info
Information on how to contribute this GitHub organization and related documents
transformer-rgb-indices
Contains rgb data transformers + greenness calculations
AgPipeline.github.io
Web site for GitHub related information for this organization
agpypeline
Python library of common classes and functions
template-rgb-plot
Transformer template for plot level RGB data analysis. Please read HOW_TO.md to start
template-transformer-simple
A template for creating transformers for multiple environments
transformer-canopycover
Calculates canopy cover on soil masked images (based upon TERRA REF extractors-stereo-rgb/canopycover)
transformer-opendronemap
Transformer for OpenDroneMap functionality
alpha-template-lidar-plot
Transformer template for plot level lidar data analysis. Please read HOW_TO.md to start
deprecated-base-docker-support
Implements Entry Point and provides a base docker image with transformer execution flow
transformer-ply2las
Moving to https:/github.com/uacic. Converts PLY point clouds to LAS (formerly extractors-3dscanner/ply2las in TERRAREF project)
drone-pipeline-environment
Implements Transformer class and provides docker images for the drone processing pipeline
Paper-data
Contains the instructions and scripts on how to reproduce the results found in the Drone Processing Pipeline paper
plot-base-rgb
Base code for RGB template support providing Transformer functionality
rstudio-FIELDimageR
FIELDimageR Dockerfile for the CyVerse VICE environment
transformer-betydb-csvupload
Uploads CSV files to a BETYdb instance (based upon TERRA REF computing-pipeline/extractors/betydb)
transformer-fieldmosaic
Moving to https:/github.com/uacic. Creates an RGB field mosaic with Gantry images (formerly TERRA REF extractors-stereo-rgb/fieldmosaic)
transformer-flir2tif
Moving to https:/github.com/uacic. Converts the IR bin files to geo-referenced TIF (based upon TERRA REFextractors-multispectral/flir2tif)
transformer-geostream-csvupload
Loads CSV files to GeoStreams database instance (base upon TERRA REF computing-pipeline/extractors/geostreams)
transformer-plotclip
Clips files to plot boundaries (based upon TERRA REF computing-pipeline/extractors/plotclipper)
transformer-psii2png
Moving to https:/github.com/uacic. Converts PSII sensor files to PNG (based upon TERRA REF extractors-multispectral/psii2png)
transformer-rgb_quality
Creates a quality measure on RGB images (based upon TERRA REF quality-metrics/rgb_qc)
transformer-soilmask-by-ratio
Masks soil from images using a Green-to-Red ratio comparison for each pixel
ua-gantry-environment
Moving to https:/github.com/uacic. Implements Transformer class and provides docker images for University of Arizona transformers for Common Workflow Language environment