AWS-BugBust-01 / ivadomed-01

Repository on the collaborative IVADO medical imaging project between the Mila and NeuroPoly labs.

ivadomed is an integrated framework for medical image analysis with deep learning.

The technical documentation is available here.

Installation

ivadomed requires Python >= 3.6 and < 3.9 as well as PyTorch == 1.5.0. We recommend working under a virtual environment, which could be set as follows:

virtualenv venv-ivadomed
source venv-ivadomed/bin/activate

Install from release (recommended)

Install ivadomed and its requirements from Pypi <https://pypi.org/project/ivadomed/>__:

pip install --upgrade pip
pip install ivadomed

Install from source

Bleeding-edge developments are available on the project's master branch on Github. Installation procedure is the following:

git clone https://github.com/neuropoly/ivadomed.git
cd ivadomed
pip install -e .

Contributors

This project results from a collaboration between the NeuroPoly Lab and the Mila. The main funding source is IVADO.

List of contributors

Consult our Wiki(https://github.com/ivadomed/ivadomed/wiki) here for more help