ATPs

Xiaolong Cao's repositories

PrecisionProDB

generate personalized reference protein sequences for proteome search

Language:PythonGPL-3.06 3 1

Select best protein codeing genes from models Generated from MAKER2, Cufflinks and any de novo assembling programs. Previously called MCOT, with this publication (http://www.sciencedirect.com/science/article/pii/S0965174815000144).

Language:Python2 40

PrecisionProDB_references

MIT2 30

atps.github.io

Language:Ruby1 10

Beautiful-Visualization-with-R

《R语言数据可视化之美》配套代码

Language:PostScript1 10

DecoyPYratPlus

DecoyPYratPlus - Decoy Sequence Database Creation for Proteomic Mass Spectrometery Analyses

Language:PythonMIT100

gemini

a lightweight db framework for exploring genetic variation.

Language:PythonMIT100

HumanGeneticsReference

some data I collected for human genes

Language:PythonGPL-3.01 20

Manduca

summarize and share some data about the research I participated about Manduca sexta

100

MobaXterm-Keygen

MobaXterm Keygen Originally by DoubleLabyrinth

Language:PythonGPL-3.0100

pacbio_whole_genomes

a list of species with whole genome sequenced by pacbio long reads

MIT1 20

proteomics-metadata-standard

The Proteomics Experimental Design file format: Standard for experimental design annotation

Language:PythonGPL-2.0100

pseudoga

Cell pseudotime reconstruction based on genetic algorithm

Language:R1 10

rcircos

Language:R100

safepy

Python implementation of Spatial Analysis of Functional Enrichment (SAFE)

Language:PythonGPL-3.01 10

trinityrnaseq

Trinity RNA-Seq de novo transcriptome assembly

Language:PerlBSD-3-Clause1 10

wanghao1991217.github.io

Language:HTML100

XCProject

common used codes

Language:HTML1 20

zhujiang

1 10

zotero-if-pro-max_cracked

Zotero-IF-PRO-MAX 破解版已排除正版中植入的破坏程序代码安心使用 A cracked version of zotero-if-pro-max

100

3D-MSNet

A point cloud based deep learning model for untargeted feature detection and quantification in profile LC-HRMS data

NOASSERTION000

biosaur2

Language:PythonApache-2.0000

denovopipeline

Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.

000

go-proxy-bingai

用 Vue3 和 Go 搭建的微软 New Bing 演示站点，拥有一致的 UI 体验，支持 ChatGPT 提示词，国内可用。

MIT000

gpt_academic

为ChatGPT/GLM提供实用化交互界面，特别优化论文阅读/润色/写作体验，模块化设计，支持自定义快捷按钮&函数插件，支持Python和C++等项目剖析&自译解功能，PDF/LaTex论文翻译&总结功能，支持并行问询多种LLM模型，支持chatglm2等本地模型。兼容文心一言, moss, llama2, rwkv, claude2, 通义千问, 书生, 讯飞星火等。

Language:PythonGPL-3.0000

IQMMA

Project improves quantitative analysis by applying multiple feature detection tools and pick the best from their results.

Apache-2.0000

ms2rescore

Modular and user-friendly platform for AI-assisted rescoring of peptide identifications