AMChalkie

Alistair Chalk's repositories

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Modified or extracted from other programs

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Annotate genomic contexts and discover functional element enrichments

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JAVA framework for accurate SNV assessment

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:exclamation: This is a read-only mirror of the CRAN R package repository. LSD — Lots of Superior Depictions

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Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.

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Test data for MultiQC. See https://github.com/ewels/MultiQC

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REDItools are python scripts to investigate RNA editing at genomic scale.

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A tool for the calculation of RNA-editing index for RNA seq data

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This repository contains code and scripts used to generate and analyse data for the superTranscript/Lace paper.

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SUPPA2: Fast quantification of differential splicing

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Brings transcriptomics to the tidyverse

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