Alejandro Martinez's repositories

gp2-manifest-checkupload

GP2 QC - Upload - Visualise app

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practical-python

Practical Python Programming (course by @dabeaz)

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asap_sc_collect

A simple app to collect asap single cell data on a standard format

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aws-s3-integrity-check

Bash script to check the md5 integrity of a set of files that have previously been uploaded into an AWS S3 bucket.

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echolocatoR

Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.

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echor_wrapperPipes

Some workflows and utils to use echolocatoR

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LID-CPH

Uncovering genetic variants associated with LiD using CPH models, and perform functional annotation to understand nominated loci

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longitudinal-GWAS-pipeline

Repository for Nextflow pipeline to perform GWAS with longitudinal capabilities

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MAGMA_Celltyping

Find causal cell-types underlying complex trait genetics

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metabrainQC

Some code to automate eQTL data from metabrain (https://www.biorxiv.org/content/10.1101/2021.03.01.433439v1)

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