ABMI's repositories
Genomic-CDM
Repository for development of the genomic module of the CDM.
WebAPI
OHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications
CoxibVsNSAIDs
Comparative effectiveness study between celecoxib vs NSAIDs
RCDMViewer
Radiology CDM Viewer
rocker-versioned
Run current & prior versions of R using docker
rocker
R configurations for Docker
CVDRiskPredictionByDeepLearning
CVD Risk Prediction Deep Learning Algorithm
PhenotypeLibrary
A repository to store validated phenotype cohort definitions, with all associated source code, documentation, and validation results.
StudyProtocolSandbox
This repository is for developing study packages for OHDSI studies. Once completed, they can be moved to the StudyProtocols repository.
CDM_v5.3.1_to_v6
ETL code for updating OMOP-CDM v6 using OMOP-CDM v5.3.1
FeatureExtraction
An R package for generating features (covariates) for a cohort using data in the Common Data Model.
PredictionComparison
[Under development] An R package for comparing patient-level predictions and prediction models
MIMIC-III
This repository for uploading MIMIC-III DB to PostgreSQL Server. (After test, It will be public)
StandardPhenotypes
Standard Phenotype library
StudyProtocols
Repository of OHDSI Collaborative Research Protocols