18152189583

mmclassification-3D

sites

【编程随想】收藏的各色网站

books

【编程随想】收藏的电子书清单（多个学科，含下载链接）

caMicroscope

Digital pathology image viewer with support for human/machine generated annotations and markups.

Feature-augmented-embedding-machine

[Nature Biomedical Engineering, 2020] A broadly applicable algorithm for dimensionality reduction to reveal underlying trends in a range of biomedical datasets

PatRecon

Patient-specific reconstruction of volumetric computed tomography images from few-view projections via deep learning

mimic-iv

Deprecated. For the latest MIMIC-IV code, please refer to: https://github.com/MIT-LCP/mimic-code

Radiomics-research-by-using-Python

Radiomics (here mainly means hand-crafted based radiomics) contains data acquire, ROI segmentation, feature extraction, feature selection, machine learning modeling, and stastical analysis.

Time-series-prediction

tfts: Time Series Deep Learning Models in TensorFlow

Stock

Stock Market Prediction Using Unsupervised Features

age_prediction

Tensorflow implementation of 3D CNN for brain age prediction from MRI

pydicom

Read, modify and write DICOM files with python code

pymrmr

Python3 binding to mRMR Feature Selection algorithm (currently not maintained)

Lung-Lobes-Segmentation-in-CT-Scans

Segmentation of lung, pulmonary vessels and pulmonary fissures in CT Scans

tcia-ct-scan-dataset

Dataset of head and neck CT scans and segmentations in NRRD format.

Brain-Tumor-Segmentation

Attention-Guided Version of 2D UNet for Automatic Brain Tumor Segmentation

U-Net-Brain-Tumor-Segmentation

mimic-code

MIMIC Code Repository: Code shared by the research community for the MIMIC family of databases

reproducibility-mimic

Evaluating the reproducibility of mortality prediction studies in the MIMIC-III database

NeuroKit.py

A Python Toolbox for Statistics and Neurophysiological Signal Processing (EEG, EDA, ECG, EMG...).

icu-model-transfer

Evaluating methods to improve model transfer for intensive care unit models

XNet

CNN implementation for medical X-Ray image segmentation

dbscan

Density Based Clustering of Applications with Noise (DBSCAN) and Related Algorithms - R package

dbscan

Python implementation of 'Density Based Spatial Clustering of Applications with Noise'

python-wsi-preprocessing

Python Whole Slide Image Preprocessing

Slicer

Multi-platform, free open source software for visualization and image computing.

LungRecurrence

Pytorch-Medical-Segmentation

This repository is an unoffical PyTorch implementation of Medical segmentation in 2D and 3D.

SimpleITK

SimpleITK: a layer built on top of the Insight Toolkit (ITK), intended to simplify and facilitate ITK's use in rapid prototyping, education and interpreted languages.

DPIR

Plug-and-Play Image Restoration with Deep Denoiser Prior (IEEE TPAMI 2021) (PyTorch)