0xalizk / publications

2020

The Computational Intractability Law Molds the Topology of Biological Networks
^{Ali Atiia, Corbin Hopper, Katsumi Inoue, Silvia Vidal, and Jérôme Waldispühl .
Applied Network Sci 5, 34 (2020). (PDF, HTML, ReadCube)}

2020

The Emergence of Component and Sign Distribution in Biological Networks
^{Ali Atiia, Draft.}

2018

The Computational Weight of Biological Processes
^{Ali A Atiia, Doctoral dissertation, McGill University.}

2017

Computational Intractability Generates the Topology of Biological Networks
^{Ali A Atiia, Corbin Hopper, and Jérôme Waldispühl. Proceedings of the 8th ACM-BCB (pp. 500-509).}

2017

DNA Knitting: robust and programmable fabrication of DNA nano-structures at sub-nanometer resolution
^{Ali A Atiia. Technical report.}

2016

KenanDB: Curated Repository of Experimentally-validated Biological Networks
^{Ali A Atiia. Technical report.}

2016

Single-Primer Polymerase Chain Reactions
^{Ali A Atiia. Manuscript.}

2015

A Molecular Algorithm Solving NP-Complete Problems by Mimicking the Cell
^{Ali A Atiia. Technical Report.}

2011

DNA Computation of Solutions to Edge-Matching Puzzles
^{Ali Atiia. Master dissertation, Concordia University}