Error in stopAndCache(title) when reading in EPIC v1 and v2 Idat files

[siridandu]

Hi, I am running into an issue with the stopAndCache(title):

> sdfs <- lapply(idats, function(idat) { readIDATpair(idat) })

Error in stopAndCache(title) :
| File idatSignature needs to be cached to be used in sesame.
| Please make sure you have updated ExperimentHub and try
| > sesameDataCache()
| to retrieve and cache needed sesame data.

When I run sesameDataCache() it completes without any errors. However, when I try to read in the sdfs again, I still get the same error. I have updated the ExperimentHub, sesame, and sesameData packages, and tried installing and running the BiocFileCache package as well.

When I run this, it shows that these packages are out of date. Are they relevant to this issue? Thank you so much for your help!

Session Info:

[Wanding Zhou - Bioinformatics]

do you see data being downloaded from sesameDataCache? can you run sesameDataGet("idatSignature") without issue?

[siridandu]

Thank you for your response! I am not sure if there is supposed to be an output, but when I run sesameDataCache(), it runs with no error and no output. When I run sesameDataGet("idatSignature") after sesameDataCache, I recieve the exact same error as before.

[arualemsti]

Hello! I'm having the same issue. I am wondering if you've found a solution as of yet?

Thanks!

[MitaliKatoch]

Thank you for your response! I am not sure if there is supposed to be an output, but when I run sesameDataCache(), it runs with no error and no output. When I run sesameDataGet("idatSignature") after sesameDataCache, I recieve the exact same error as before.

Hey, I am dealing with this exact similar error. Could you let me know if you found any solution?