zhoux85 / download_TCGA_GDC

Travel the TCGA dir, and run gdc-client to download specific data

download_TCGA_GDC

Travel the TCGA dir, and run gdc-client to download specific data

The orgnization of TCGA dir should be:
TCGA_dir
    |-- tissues
        |-- data types
          |-- gdc_manifest file (only one file)

Note:

1. gdc-client should be added in $PATH;
2. download gdc_manifest file first;
3. only ONE gdc_manifest file in each data type dir.