zhixingfeng

iGDA

Detect and phase minor SNVs from long-read sequencing data

seqPatch

R package detecting DNA modifications by kinetic data of SMRT sequencing

qDNAmod

A toolkit for quantitative DNA modification detection from SMRT sequencing data

bioconda-recipes

Conda recipes for the bioconda channel.

bioHMM

conda_tutorial

Conda Tutorial

countlines

czlab_perl_lib

docker-outline

A simple and reliable self-hosted plan for Outline.

glmnet

:exclamation: This is a read-only mirror of the CRAN R package repository. glmnet — Lasso and Elastic-Net Regularized Generalized Linear Models. Homepage: http://www.jstatsoft.org/v33/i01/.

igda_contextmodel

The context effect model used in iGDA

iGDA_julia

iGDA_legacy

mCross

mummerSV

Detect structure variation quantitatively by mummer from long reads data

outline-wiki-docker-compose

Installation and docker compose to self host outline wiki: https://www.getoutline.com/

Ranno

Deal with gene annotation and reference genomes

rGDA

shell

misc shell script

splitreadsbymovie

split PacBio reads in fasta file by movie name

zhixingfeng.github.io