Zonglei Zhen's repositories
app-dipy-afq
This service takes in a nifti and tck output from Multishell Tractography w/ CSA or SHORE and outputs the CST and ILF segmentations in .tck file format of both the left and right hemispheres.
deep-retina
deep-retina is a project to build a convolutional neural network that can predict retinal ganglion cell responses to natural stimuli with high accuracy.
deep-visualization-toolbox
DeepVis Toolbox
dnnbrain
Use DNN to study the brain and use brain measurement to evaluate DNN
NaturalVisionProject
Brain imaging data for ImageNet
DstRF
MEG/EEG analysis tools : Direct estimation of TRFs over the source space
HSOM
Hierarchical self-organizing maps for unsupervised pattern recognition
lnpy
Python code for estimation of linear-nonlinear model parameters
MEG-Raven
Characterize brain dynamics in RAVEN problem solving with MEG
micaopen
Open Scripts / Pipelines from the Multimodal Imaging and Connectome Analysis Lab
minisom
:red_circle: MiniSom is a minimalistic implementation of the Self Organizing Maps
moco-psychophysics-stimuli
Stimuli for the motion coherence (moco) psychophysics project
mTRF-Toolbox
A MATLAB Package for Relating Neural Signals to Continuous Stimuli
NeuroDL_Weekly_disscussion_group
认知计算神经联盟 讨论小组
NeuropsychologicalAssessmentToolbox
A collective of neuropsychological assessment tasks for the glioma patients
pymtrf
Translation of the mtrf-Toolbox for Matlab (see https://github.com/mickcrosse/mTRF-Toolbox).
pytorch-cnn-visualizations
Pytorch implementation of convolutional neural network visualization techniques
rbfn
Radial Basis Function Network - PyTorch
RetinalResources
Code for "A Unified Theory of Early Visual Representations from Retina to Cortex through Anatomically Constrained Deep CNNs", ICLR 2019
single-cell-tutorial
Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"