yjiao

codeforces-api

Tools for estimating problem difficulty, predictors rating trajectories, and tracking individual learning progress in algorithms.

codeforces_predict

ML-powered codeforces rating change predictions and practice suggestions

algorithms

Scripts written for algorithm competitions.

bacteria_genomic_analysis

Scripts used for genomic analysis of a bacterial pathogen, downstream of the breseq program.

ml_implementations

implementations of papers/ libraries for personal understanding

cancer_mutation_calling

use vardict, strelka, and mutect, keep mutations by consensus voting, force call downstream mutations, final output in maflite format for Firehose use

folly

An open-source C++ library developed and used at Facebook.

hanabiRL

hnswlib

Header-only C++/python library for fast approximate nearest neighbors

prepost_shared