Yiman Zhang's repositories
ActflowToolbox
The Brain Activity Flow ("Actflow") Toolbox. Tools to quantify the relationship between connectivity and task activity through network simulations and machine learning prediction. Helps determine how connections contribute to specific brain functions.
automagic
Automagic
brain-smart.github.io
<span style="color:red">BSMART: A Matlab/C Toolbox for Analyzing Brain Circuits</span>
braindecode
A deep learning toolbox to decode raw time-domain EEG.
Community_Detection
A curated list of community detection research papers with implementations.
EEG-Motor-Imagery-Classification-CNNs-TensorFlow
EEG Motor Imagery Tasks Classification (by Channels) via Convolutional Neural Networks (CNNs)
frites
Framework for Information Theoretical analysis of Electrophysiological data and Statistics
GC_SS_PNAS
reproduction of the simulations of a critical paper, with the State Space formulation of Granger Causality
Improved-Covariance-Matrix-Estimators
https://ieeexplore.ieee.org/document/8688582
jidt
JIDT: Java Information Dynamics Toolkit for studying information-theoretic measures of computation in complex systems
keras
Deep Learning for humans
labstreaminglayer
LabStreamingLayer super repository comprising submodules for LSL and associated apps.
MEG-ROI-nets
Stationary network analysis for MEG
mMSE
Code & short tutorial for modified multi-scale entropy analysis
MODA
Numerical toolbox developed by the Nonlinear & Biomedical Physics group at Lancaster University for analysing real-life time-series.
Modularity_algorithm_NN
Using this algorithm, one can extract the main brain modular structures ), which fluctuate over time during rest and task. . The proposed framework simply takes as input a set of connectivity matrices, without making any constraint on how these matrices are computed. Reference: Kabbara et al. 2019, Detecting modular brain states in rest and task
motion-FC-metrics
Code to perform QC-FC analysis on human connectome project (HCP) data with different functional connectivity (FC) measures
naturalistic_arm_movements_ecog
Analysis of human behavioral and neural variability during naturalistic arm movements.
nctpy
A toolbox for implementing Network Control Theory analyses in python
Neural-Decoding-Project
Hippocampus spike activity related to the depression-related behaviors after stress
NiceBot
Data and code of the BrainLinks-BrainTools NiceBot project, manuscript "Human-Compliant Robot Behavior: Combining Continuous Subjective Evaluation with Multimodal Deep Regression Analysis"
PACTools
EEGLAB plug-in to compute Phase-Amplitude Coupling using different methods
pcm_toolbox
Pattern Component Modelling toolbox for multivariate analysis