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João (xJoaoCHRx)

xJoaoCHRx

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Location:Brazil

Twitter:@ChruscielJoao

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João's starred repositories

patchworklib

Patchwork for matplotlib: A subplot manager for intuitive layouts in matplotlib, seaborn, and plotnine.

Language:Jupyter NotebookLicense:GPL-3.0Stargazers:369Issues:0Issues:0

aarhus_tnu_nanopore_analysis

One stop shop with tutorials and scripts necessary to perform DNA Nanopore Analysis

License:MITStargazers:1Issues:0Issues:0

computer-science

🎓 Path to a free self-taught education in Computer Science!

License:MITStargazers:170411Issues:0Issues:0

cDNA_pipeline

Language:NextflowLicense:MITStargazers:1Issues:0Issues:0

pb-metagenomics-tools

Tools and pipelines tailored to using PacBio HiFi Reads for metagenomics

Language:HTMLLicense:BSD-3-Clause-ClearStargazers:167Issues:0Issues:0

pyCircos

python Circos

Language:PythonLicense:GPL-3.0Stargazers:337Issues:0Issues:0

pyCirclize

Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)

Language:PythonLicense:MITStargazers:726Issues:0Issues:0

NanoMethViz

Language:RLicense:Apache-2.0Stargazers:23Issues:0Issues:0

MultiQC

Aggregate results from bioinformatics analyses across many samples into a single report.

Language:JavaScriptLicense:GPL-3.0Stargazers:1204Issues:0Issues:0

awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

License:MITStargazers:3142Issues:0Issues:0

Awesome-Bioinformatics

A curated list of awesome Bioinformatics libraries and software.

Stargazers:3100Issues:0Issues:0

nextflow

A DSL for data-driven computational pipelines

Language:GroovyLicense:Apache-2.0Stargazers:2705Issues:0Issues:0

readfish

CLI tool for flexible and fast adaptive sampling on ONT sequencers

Language:PythonLicense:GPL-3.0Stargazers:168Issues:0Issues:0

ComplexHeatmap

Make Complex Heatmaps

Language:RLicense:NOASSERTIONStargazers:1294Issues:0Issues:0

DMA

Reducing the prices of DMA Firmware

Language:PythonStargazers:268Issues:0Issues:0

tidytuesday

Official repo for the #tidytuesday project

Language:HTMLLicense:CC0-1.0Stargazers:6775Issues:0Issues:0

metan

Package for multi-environment trial analysis

Language:RLicense:GPL-3.0Stargazers:35Issues:0Issues:0

dorado

Oxford Nanopore's Basecaller

Language:C++License:NOASSERTIONStargazers:489Issues:0Issues:0

Basecalling-comparison

A comparison of different Oxford Nanopore basecallers

Language:PythonLicense:GPL-3.0Stargazers:313Issues:0Issues:0

python-workshop-base

The master template repository for Monash Data Fluency Python workshop modules

Language:Jupyter NotebookLicense:NOASSERTIONStargazers:24Issues:0Issues:0

vim_settings

Rob's Custom VIM settings

Language:Vim scriptStargazers:9Issues:0Issues:0

.tmux

🇫🇷 Oh my tmux! My self-contained, pretty & versatile tmux configuration made with ❤️

Language:ShellLicense:MITStargazers:21848Issues:0Issues:0

tmux

tmux source code

Language:CLicense:NOASSERTIONStargazers:34737Issues:0Issues:0

DeepMod2

DNA 5mC methylation detection from Dorado or Guppy basecalled Oxford Nanopore reads

Language:Jupyter NotebookLicense:MITStargazers:32Issues:0Issues:0

DCNL_NANOPORE_PIPELINE

NextFlow pipeline used by the Developmental Cognitive Neuroscience Lab (DCNL) to process Oxford Nanopore (ONT) DNA methylation data

Language:NextflowLicense:MITStargazers:1Issues:0Issues:0

DMA-CFW-Guide

Detailed Instructions on the creation of custom/modified DMA (attack) Firmware based on pcileech-fpga

Stargazers:379Issues:0Issues:0

pcileech-fpga

FPGA modules used together with the PCILeech Direct Memory Access (DMA) Attack Software

Language:VerilogStargazers:820Issues:0Issues:0

pcileech

Direct Memory Access (DMA) Attack Software

Language:CLicense:AGPL-3.0Stargazers:4812Issues:0Issues:0

pygg

PyGG Python Game Hacking Library for bypassing AC / AT

Language:PythonStargazers:11Issues:0Issues:0