Wirtz Lab's repositories
frame-interpolation
FILM: Frame Interpolation for Large Motion, In ECCV 2022.
HX_Motility_HierarchicalClustering
This is the final version of motility clustering package
HX_MSD_Diffusivity
This script was written by HX to compute MSD and Diffusivity from Manually tracked motility data (ImageJ, MetaMorph)
MJH_Particle_Aggregation_Tracking
This script was initially written by MJH to track the aggregation of NK cells.
Python_Tutorial
teaching python to anyone in Wirtz Lab
VAMPIRE_open
open source version of VAMPIRE analysis : visually-aided morpho-phenotyping recognition
ashlar
ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration
ECCV2022-RIFE
ECCV2022 - Real-Time Intermediate Flow Estimation for Video Frame Interpolation
hover_net
Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.
imbalanced-regression
[ICML 2021, Long Talk] Delving into Deep Imbalanced Regression
ingest-validation-tools
HuBMAP data submission guidelines, and tools which check that submissions adhere to those guidelines.
microns-nda-access
Provides instructions and Docker configurations for accessing the microns_phase3_nda schema and/or an isolated database container.
MinImagen
MinImagen: A minimal implementation of the Imagen text-to-image model
MinImagen-1
MinImagen: A minimal implementation of the Imagen text-to-image model
outpainting_srn
Wide-Context Semantic Image Extrapolation, CVPR2019
pytorch-CycleGAN-and-pix2pix
Image-to-Image Translation in PyTorch
segment-anything
The repository provides code for running inference with the SegmentAnything Model (SAM), links for downloading the trained model checkpoints, and example notebooks that show how to use the model.