Beast code in Giters

John B. Cole's repositories

pypedal

2.0

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Animal-Breeding-Plans

"Animal Breeding Plans, Third Edition, Sixth Printing" by Professor Jay L. Lush of Iowa State University.

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gene-editing

Python programs and notebooks used for simulation of gene editing in dairy cattle breeding programs.

Language:Jupyter NotebookCC0-1.02 2 1

multiple-recessives

Programs for simulation of strategies for managing multiple recessives in a dairy cattle population.

Language:Jupyter NotebookCC0-1.02 2 2

seaborn

Improved matplotlib for statistical data visualization

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2016-journal-of-dairy-science

Local repo for my 2016 revision to the Zotero JDS style

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abrash-black-book

Markdown source for Michael Abrash's Graphics Programming Black Book

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bestpred

Programs for computing best prediction of lactation persistency.

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data-analytics-course

A repository for a nine-part series on data analytics using the Python stack

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GEMMA

Genome-wide Efficient Mixed Model Association

Language:C++GPL-3.0020

pers-nets

Find gene networks associated with lactation persistency.

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pypedal3

Tools for pedigree analysis (Python 3 version)

Language:PythonLGPL-2.1020

scholar.py

A parser for Google Scholar, written in Python

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styles

Official repository for Citation Style Language (CSL) citation styles.

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visualization

Scripts I've written to create graphics for various publications.

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wintermind.github.io

GitHub website

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