wengong-jin / hgraph2graph

Hierarchical Generation of Molecular Graphs using Structural Motifs

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Question about the meaning of atom type classification

HayeonLee opened this issue · comments

Thanks for your active reply!

When I follow your code and paper since I am a newbie of GNN, I have a question.

As I understand, generally node classification means a kind of node clustering.

Yet when I read your paper, there is node type (atom type) classification.

I guess it is predicting atom type among H, C, ... etc not the node clustering.

Am I right? In that case, could you let me know which part of your code is atom type classification?

Thanks in advance.

Hi,

My model only predicts the motif type, which includes atom types (H, C, etc.).