Out-of-memory occurs at preprocessing training data

[Hwidong Na]

Hi,

I got an unexpected error due to the memory consumption during preprocessing.

Environment:
numpy 1.19.2
python 3.7.10
pytorch 1.8.0
rdkit 2020.09.1.0
Mem: 64GB

Any suggestions?

Best,
Hwidong

[Hwidong Na]

Using a machine with larger memory solved this issue.

[Matheus Müller]

How much memory did you need to run it?