Fan Wang's repositories
applied-computational-genomics
Applied Computational Genomics Course at UU: Spring 2017
cloud-automation
Automation for standing up Gen3 commons on AWS, GCP, Azure, and on-prem
deeplearning4j
Deep Learning for Java, Scala & Clojure on Hadoop & Spark With GPUs - From Skymind
EDec
EDec (Epigenomic Deconvolution) is a technique that, starting from methylation and gene expression profiles of bulk tissue samples, infers cell type composition of each input sample as well as DNA methylation and gene transcription profiles of constituent cell types.
ERIS
Error Reduction In Sequencing
genetic-data-analysis-rcc-1
Research Computing Center introduction to analysis and visualization of genetic data, Part 1
genetic-data-analysis-rcc-2
Research Computing Center introduction to analysis and visualization of genetic data, Part 2
genomics
Some R that I coded for genomic analyses
introstat-spring-2017
Course materials for Stat 20 and Stat 131A, Spring 2017, at UC Berkeley
ncbi_eutility_query_to_graph
Demonstrate a simple example of graph visualization built with Neo4j Aura application using data from NCBI API.
PrediXcan-1
Code for the in-dev PrediXcan Project
ST205A
Homework for STAT 205A - Berkeley
stat2
Stat2 Introduction to Statistics, UC Berkeley
stat243-fall-2015
This repository holds all course materials for the fall 2015 offering of Statistics 243 at UC Berkeley.
stat247c
UC Berkeley, Stat 247C, Fall 2015
TCGA-ASE-Analysis-Pipeline
TAAP (TCGA ASE Analysis Pipeline): A pipeline that correlates somatic mutation in tumor/normal WGS paired samples with gene-level allele-specific expression in an effort to systematically uncover cis-regulatory variants involved in tumorigenesis.