refactor imc solve

Question

junghans opened this issue 5 years ago · comments

Inside the scripts it calls:

linsolve.py --reg 0 CG-CG.packed CG-CG.packed.sol

which reads CG-CG.packed.gmc and CG-CG.packed.imc and writes results to CG-CG.packed.sol.

Yes

Christoph Junghans · Answer 1 · Thu Sep 19 2019 21:57:37 GMT+0800 (China Standard Time)

Christoph Junghans · Answer 2 · Fri Sep 20 2019 21:26:13 GMT+0800 (China Standard Time)

Christoph Junghans · Answer 3 · Sat Sep 21 2019 00:45:26 GMT+0800 (China Standard Time)

Jens · Answer 4 · Sat Sep 21 2019 01:15:15 GMT+0800 (China Standard Time)

all the packed stuff is intermediate stuff? So we go from

CG-CG.gmc
CG-CG.idx -> CG-CG.dpot.imc
CG-CG.imc

?

Jens · Answer 5 · Sat Sep 21 2019 03:14:47 GMT+0800 (China Standard Time)

But the potential solve and then unpack can be executed more than once for different pairs? That is also the part with the regularisation parameter?

Christoph Junghans · Answer 6 · Sat Sep 21 2019 08:56:38 GMT+0800 (China Standard Time)

Yes, It is done for each IMC group. But solve and unpack are only done once for each group.

Christoph Junghans · Answer 7 · Sun Sep 22 2019 06:59:31 GMT+0800 (China Standard Time)

@DRosen285 any comments?

Christoph Junghans · Answer 8 · Sun Sep 29 2019 07:42:26 GMT+0800 (China Standard Time)

Done in #411