tybiot's repositories
SBMLLint
Model checker for SBML compliant models.
CPI_extraction
CPI Extraction
FastTargetPred
Target prediction
R-BERT
Pytorch implementation of R-BERT: "Enriching Pre-trained Language Model with Entity Information for Relation Classification"
bern
A neural named entity recognition and multi-type normalization tool for biomedical text mining
pubtator
Retrieve and process PubTator annotations
ChEMBL_Structure_Pipeline
ChEMBL database structure pipelines
Agriculture_KnowledgeGraph
农业知识图谱(AgriKG)：农业领域的信息检索，命名实体识别，关系抽取，智能问答，辅助决策
pubmed-lookup
Lookup PubMed records and make Publication objects with info about a scientific publication
metal
Snorkel MeTaL: A framework for training models with multi-task weak supervision
comb_dist_direct_relex
Combining Distant and Direct Supervision for Neural Relation Extraction
snorkel-extraction
A previous version of Snorkel focused on information extraction
open-entity-relation-extraction
Knowledge triples extraction and knowledge base construction based on dependency syntax for open domain text.
Causal_Relation_Extraction
Causal Relation Extraction and Identification using Conditional Random Fields
Python
All Algorithms implemented in Python
Schema-based-Knowledge-Extraction
Code for http://lic2019.ccf.org.cn/kg 信息抽取。使用基于 BERT 的实体抽取和关系抽取的端到端的联合模型。
conda-rdkit
Conda build recipe for the rdkit
tacred-relation
PyTorch implementation of the position-aware attention model for relation extraction
concrete_NLP_tutorial
An NLP workshop about concrete solutions to real problems
pdftabextract
A set of tools for extracting tables from PDF files helping to do data mining on (OCR-processed) scanned documents.
tagger
Named Entity Recognition Tool
dml
D's Machine Learning is a machine learning toolkit for python,focus on rightness but efficiency
RMG-Py
Python version of the amazing Reaction Mechanism Generator (RMG).
ChineseNER
named entity recognition for Chinese.
Att-ChemdNER
Att-ChemdNER
element
A Vue.js 2.0 UI Toolkit for Web
django-blog-tutorial
基于 Python3.5 和 Django 1.10 的 Django Blog 项目。
EventDrops
A time based / event series interactive visualization using d3.js