gene-modules

There are 1 repository under gene-modules topic.

parashardhapola / scarf
Toolkit for highly memory efficient analysis of single-cell RNA-Seq, scATAC-Seq and CITE-Seq data. Analyze atlas scale datasets with millions of cells on laptop.
bioinformatics single-cell-genomics single-cell-rna-seq dimension-reduction clustering umap tsne big-data cite-seq single-cell-atac-seq memory-efficient scalable-data-analysis scrna-seq scatac-seq pseudotime multiomics gene-modules differential-expression graph-analytics genomics
Language:Python 87
greenelab / phenoplier
PhenoPLIER
software tool twas complex-traits gene-modules unsupervised-learning
Language:Jupyter Notebook 11
greenelab / phenoplier_manuscript
PhenoPLIER manuscript
manubot manuscript complex-traits gene-modules unsupervised-learning
Language:TeX 1
camilababo / BIONIC
This repository contains MSc thesis results using BIONIC (developed by Duncan Forster at The University of Toronto) for the prediction of Arabidopsis's temperature-responsive gene modules.
arabidopsis-thaliana deep-learning gene-modules
Language:Jupyter Notebook 0