Giters
tariks
/
peakachu
Genome-wide contact analysis using sklearn
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59
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2
Issues:
22
Forks:
10
tariks/peakachu Issues
Peakachu does not work with .hic files generated with juicertools_2.20.00
Closed
a year ago
Comments count
7
dtype error
Updated
a year ago
Comments count
4
Error with cooler files from 4DN
Closed
a year ago
Comments count
2
numpy error for peakachu pool
Updated
a year ago
Comments count
1
diffPeakachu with newer models
Updated
2 years ago
Comments count
4
OS error
Updated
2 years ago
How to evaluate the detected loops?
Closed
3 years ago
Comments count
2
Question regarding fig. 2 in your paper
Updated
3 years ago
Comments count
2
Error with available model file
Closed
3 years ago
Comments count
3
The predicted location information of the loop file exceeds the size of the chromosomes of the genome
Closed
3 years ago
Comments count
2
Error when running with pre-trained 90% model
Closed
3 years ago
Comments count
3
How to define sample-specific loop
Updated
4 years ago
MemoryError on CentOS 7.6 Cluster
Closed
4 years ago
Comments count
3
How to transform our HiC matrix data or processed reads to the training .bedpe file.
Updated
4 years ago
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7
if k != chromname
Closed
4 years ago
Comments count
1
loops at resolutions other than 10kb
Closed
4 years ago
Comments count
1
How to find annotation files of other matrix files from 4DN
Updated
5 years ago
Comments count
1
How to get the .bed files relative to the matrix and how to get the picture similar to example you list
Updated
5 years ago
Comments count
5
How can I get the picture with 'black spots'(which means loops) with juicebox
Closed
5 years ago
peakachus score_chromosome question
Closed
5 years ago
Comments count
7