Not able to reproduce the workflow

Question

Not able to reproduce the workflow

drighelli opened this issue 3 years ago · comments

Hi,

I noticed your software and I'd like to apply it to a spatial dataset in order to find the spatially variable genes, but to better understand how to use it, I'm trying to execute your instructions for the installation and the analysis.

While doing this process I found a few inconsistencies that are not allowing me to proceed with the analysis steps.

I'm reporting them here so hopefully, you can help me to solve them.

I tried the first installation method and at the end of the process, I don't have the splotch_stan_model binary available anywhere. Do you have any suggestions to fix this?
I noticed that the downstream analysis tutorial in python has as requisites the generate_splotch_input_files -c Count_Tables_mouse/* -m metadata.tsv -s 2389.0 -l 3 -d 100 -o data_three. I think the right command is splotch_generate_input_files and also the input counts folder should be just Count_Tables. May I suggest adding the examples folder on top of these command paths?
While looking at the second required command for the tutorial it says: splotch -g 3661 -n 200 -c 4 -b splotch_three_level -d data_three -o output_three. Where do I find the splotch_three_level command? Also, is this different from the previously mentioned stan model?

Thanks a lot,
Dario

Tarmo Äijö · Answer 1 · Wed Sep 22 2021 00:35:01 GMT+0800 (China Standard Time)

Thanks for your message!

Could you please run the pip commands in verbose mode (-v) so that we get a bit more information about the issue(s). Does it look like the installation is successful?

Your second and third points are valid; I have updated the notebook based on your comments. For instance, splotch_three_level should be splotch_stan_model and the directories were not correct.

Tarmo

dario righelli · Answer 2 · Thu Sep 23 2021 15:53:23 GMT+0800 (China Standard Time)

Hi Tarmo,

thanks for your reply.

I'm going to paste here the pip install output, it's a bit long.
Btw It says "finished successfully"...

I'm on macOS Catalina (v. 10.15.7)


/Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/pip/_internal/commands/install.py:232: UserWarning: Disabling all use of wheels due to the use of --build-option / --global-option / --install-option.
  cmdoptions.check_install_build_global(options)
Using pip 21.1.3 from /Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/pip (python 3.9)
Non-user install because user site-packages disabled
Created temporary directory: /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-ephem-wheel-cache-wd21695h
Created temporary directory: /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-tracker-oy0jbzpy
Initialized build tracking at /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-tracker-oy0jbzpy
Created build tracker: /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-tracker-oy0jbzpy
Entered build tracker: /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-tracker-oy0jbzpy
Created temporary directory: /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-install-jkfdgl5b
Collecting git+https://****@github.com/tare/Splotch.git
  Created temporary directory: /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w
  Cloning https://****@github.com/tare/Splotch.git to /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w
  Running command git clone -q 'https://****@github.com/tare/Splotch.git' /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w
  Added git+https://****@github.com/tare/Splotch.git to build tracker '/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-tracker-oy0jbzpy'
    Running setup.py (path:/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w/setup.py) egg_info for package from git+https://****@github.com/tare/Splotch.git
    Created temporary directory: /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-pip-egg-info-sc100it0
    Running command python setup.py egg_info
    running egg_info
    creating /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-pip-egg-info-sc100it0/Splotch.egg-info
    writing /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-pip-egg-info-sc100it0/Splotch.egg-info/PKG-INFO
    writing dependency_links to /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-pip-egg-info-sc100it0/Splotch.egg-info/dependency_links.txt
    writing requirements to /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-pip-egg-info-sc100it0/Splotch.egg-info/requires.txt
    writing top-level names to /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-pip-egg-info-sc100it0/Splotch.egg-info/top_level.txt
    writing manifest file '/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-pip-egg-info-sc100it0/Splotch.egg-info/SOURCES.txt'
    reading manifest file '/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-pip-egg-info-sc100it0/Splotch.egg-info/SOURCES.txt'
    adding license file 'LICENSE'
    writing manifest file '/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-pip-egg-info-sc100it0/Splotch.egg-info/SOURCES.txt'
  Source in /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w has version 0.0.1, which satisfies requirement Splotch==0.0.1 from git+https://****@github.com/tare/Splotch.git
  Removed Splotch==0.0.1 from git+https://****@github.com/tare/Splotch.git from build tracker '/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-tracker-oy0jbzpy'
Created temporary directory: /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-unpack-1s84j_to
Skipping wheel build for Splotch, due to binaries being disabled for it.
Installing collected packages: Splotch
  Attempting uninstall: Splotch
    Found existing installation: Splotch 0.0.1
    Uninstalling Splotch-0.0.1:
      Created temporary directory: /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-uninstall-3zar1_2v
      Removing file or directory /Users/inzirio/Downloads/.venv/bin/splotch
      Removing file or directory /Users/inzirio/Downloads/.venv/bin/splotch_generate_input_files
      Removing file or directory /Users/inzirio/Downloads/.venv/bin/splotch_prepare_count_files
      Created temporary directory: /Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/~plotch-0.0.1-py3.9.egg-info
      Removing file or directory /Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/Splotch-0.0.1-py3.9.egg-info
      Created temporary directory: /Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/~plotch
      Removing file or directory /Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/splotch/
      Successfully uninstalled Splotch-0.0.1
  Created temporary directory: /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-record-38egx5qa
    Running command /Users/inzirio/Downloads/.venv/bin/python3.9 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w/setup.py'"'"'; __file__='"'"'/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-record-38egx5qa/install-record.txt --single-version-externally-managed --compile --install-headers /Users/inzirio/Downloads/.venv/include/site/python3.9/Splotch --stan
    running install
    running build
    running build_py
    creating build
    creating build/lib
    creating build/lib/splotch
    copying splotch/__init__.py -> build/lib/splotch
    copying splotch/utils.py -> build/lib/splotch
    running build_scripts
    creating build/scripts-3.9
    copying and adjusting bin/splotch_prepare_count_files -> build/scripts-3.9
    copying and adjusting bin/splotch_generate_input_files -> build/scripts-3.9
    copying bin/splotch -> build/scripts-3.9
    changing mode of build/scripts-3.9/splotch_prepare_count_files from 644 to 755
    changing mode of build/scripts-3.9/splotch_generate_input_files from 644 to 755
    changing mode of build/scripts-3.9/splotch from 644 to 755
    running install_lib
    creating /Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/splotch
    copying build/lib/splotch/__init__.py -> /Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/splotch
    copying build/lib/splotch/utils.py -> /Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/splotch
    byte-compiling /Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/splotch/__init__.py to __init__.cpython-39.pyc
    byte-compiling /Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/splotch/utils.py to utils.cpython-39.pyc
    running install_data
    cp bin/mac-stanc bin/stanc
    chmod +x bin/stanc
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS         -c -fvisibility=hidden -o bin/cmdstan/stansummary.o src/cmdstan/stansummary.cpp
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS               -Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"      bin/cmdstan/stansummary.o        -Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"   -o bin/stansummary
    ld: warning: directory not found for option '-L/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb'
    ld: warning: directory not found for option '-L/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb'
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS         -c -fvisibility=hidden -o bin/cmdstan/print.o src/cmdstan/print.cpp
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS               -Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"      bin/cmdstan/print.o        -Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"   -o bin/print
    ld: warning: directory not found for option '-L/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb'
    ld: warning: directory not found for option '-L/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb'
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS         -c -fvisibility=hidden -o bin/cmdstan/diagnose.o src/cmdstan/diagnose.cpp
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS               -Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"      bin/cmdstan/diagnose.o        -Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"   -o bin/diagnose
    ld: warning: directory not found for option '-L/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb'
    ld: warning: directory not found for option '-L/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb'
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/nvector/serial/nvector_serial.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/nvector/serial/nvector_serial.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_math.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_math.o
    ar -rs stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_nvecserial.a stan/lib/stan_math/lib/sundials_5.7.0/src/nvector/serial/nvector_serial.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_math.o
    ar: creating archive stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_nvecserial.a
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodea.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodea.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodea_io.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodea_io.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_bandpre.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_bandpre.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_bbdpre.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_bbdpre.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_diag.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_diag.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_direct.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_direct.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_io.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_io.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_ls.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_ls.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls_sim.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls_sim.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls_stg.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls_stg.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls_stg1.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls_stg1.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_spils.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_spils.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_band.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_band.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_dense.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_dense.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_direct.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_direct.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_futils.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_futils.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_iterative.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_iterative.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_linearsolver.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_linearsolver.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_matrix.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_matrix.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_memory.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_memory.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nonlinearsolver.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nonlinearsolver.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nvector.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nvector.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nvector_senswrapper.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nvector_senswrapper.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_version.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_version.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sunmatrix/band/sunmatrix_band.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sunmatrix/band/sunmatrix_band.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sunmatrix/dense/sunmatrix_dense.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sunmatrix/dense/sunmatrix_dense.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sunlinsol/band/sunlinsol_band.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sunlinsol/band/sunlinsol_band.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sunlinsol/dense/sunlinsol_dense.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sunlinsol/dense/sunlinsol_dense.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sunnonlinsol/newton/sunnonlinsol_newton.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sunnonlinsol/newton/sunnonlinsol_newton.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.o
    ar -rs stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_cvodes.a stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodea.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodea_io.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_bandpre.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_bbdpre.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_diag.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_direct.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_io.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_ls.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls_sim.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls_stg.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls_stg1.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_spils.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_band.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_dense.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_direct.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_futils.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_iterative.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_linearsolver.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_math.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_matrix.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_memory.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nonlinearsolver.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nvector.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nvector_senswrapper.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_version.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunmatrix/band/sunmatrix_band.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunmatrix/dense/sunmatrix_dense.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunlinsol/band/sunlinsol_band.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunlinsol/dense/sunlinsol_dense.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunnonlinsol/newton/sunnonlinsol_newton.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.o
    ar: creating archive stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_cvodes.a
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idaa.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idaa.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idaa_io.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idaa_io.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_bbdpre.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_bbdpre.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_direct.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_direct.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_ic.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_ic.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_io.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_io.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_ls.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_ls.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_nls.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_nls.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_nls_sim.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_nls_sim.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_nls_stg.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_nls_stg.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_spils.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_spils.o
    ar -rs stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_idas.a stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idaa.o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idaa_io.o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas.o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_bbdpre.o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_direct.o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_ic.o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_io.o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_ls.o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_nls.o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_nls_sim.o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_nls_stg.o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_spils.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_band.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_dense.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_direct.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_futils.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_iterative.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_linearsolver.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_math.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_matrix.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_memory.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nonlinearsolver.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nvector.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nvector_senswrapper.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_version.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunmatrix/band/sunmatrix_band.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunmatrix/dense/sunmatrix_dense.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunlinsol/band/sunlinsol_band.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunlinsol/dense/sunlinsol_dense.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunnonlinsol/newton/sunnonlinsol_newton.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.o
    ar: creating archive stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_idas.a
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_bbdpre.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_bbdpre.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_direct.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_direct.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_io.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_io.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_ls.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_ls.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_spils.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_spils.o
    ar -rs stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_kinsol.a stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol.o stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_bbdpre.o stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_direct.o stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_io.o stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_ls.o stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_spils.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_band.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_dense.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_direct.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_futils.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_iterative.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_linearsolver.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_math.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_matrix.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_memory.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nonlinearsolver.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nvector.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nvector_senswrapper.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_version.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunmatrix/band/sunmatrix_band.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunmatrix/dense/sunmatrix_dense.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunlinsol/band/sunlinsol_band.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunlinsol/dense/sunlinsol_dense.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunnonlinsol/newton/sunnonlinsol_newton.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.o
    ar: creating archive stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_kinsol.a
    touch stan/lib/stan_math/lib/tbb/tbb-make-check
    tbb_root="../tbb_2020.3" CXX="clang++" CC="clang" LDFLAGS='-Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"  ' '/Applications/Xcode.app/Contents/Developer/usr/bin/make' -C "stan/lib/stan_math/lib/tbb" -r -f "/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb_2020.3/build/Makefile.tbbmalloc" compiler=clang cfg=release stdver=c++1y malloc CXXFLAGS="-Wno-unknown-warning-option -Wno-deprecated-copy  "
    clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11   -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I../tbb_2020.3/src/tbbmalloc -I../tbb_2020.3/src/tbbmalloc ../tbb_2020.3/src/tbbmalloc/backend.cpp
    clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11   -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I../tbb_2020.3/src/tbbmalloc -I../tbb_2020.3/src/tbbmalloc ../tbb_2020.3/src/tbbmalloc/large_objects.cpp
    clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11   -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I../tbb_2020.3/src/tbbmalloc -I../tbb_2020.3/src/tbbmalloc ../tbb_2020.3/src/tbbmalloc/backref.cpp
    clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11   -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I../tbb_2020.3/src/tbbmalloc -I../tbb_2020.3/src/tbbmalloc ../tbb_2020.3/src/tbbmalloc/tbbmalloc.cpp
    clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11   -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -o itt_notify_malloc.o -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/itt_notify.cpp
    sh ../tbb_2020.3/build/version_info_macos.sh clang++ -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -Wall -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1  -std=c++1y -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include >version_string.ver
    clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11   -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I../tbb_2020.3/src/tbbmalloc -I../tbb_2020.3/src/tbbmalloc -I. ../tbb_2020.3/src/tbbmalloc/frontend.cpp
    clang++ -E -x c++ ../tbb_2020.3/src/tbbmalloc/mac64-tbbmalloc-export.def -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -Wall -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1  -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1  -Wno-non-virtual-dtor -Wno-dangling-else -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include > tbbmalloc.def
    clang -fPIC -o libtbbmalloc.dylib backend.o large_objects.o backref.o  tbbmalloc.o  itt_notify_malloc.o frontend.o  -ldl -lpthread -dynamiclib -install_name @rpath/libtbbmalloc.dylib -stdlib=libc++ -m64 -mmacosx-version-min=10.11 -Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"   -Wl,-exported_symbols_list,tbbmalloc.def
    clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -Wall -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1  -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -D__TBBMALLOC_BUILD=1 -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I../tbb_2020.3/src/tbbmalloc -I../tbb_2020.3/src/tbbmalloc ../tbb_2020.3/src/tbbmalloc/proxy.cpp
    clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -Wall -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1  -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -D__TBBMALLOC_BUILD=1 -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I../tbb_2020.3/src/tbbmalloc -I../tbb_2020.3/src/tbbmalloc ../tbb_2020.3/src/tbbmalloc/tbb_function_replacement.cpp
    clang++ -fPIC -o libtbbmalloc_proxy.dylib proxy.o tbb_function_replacement.o  -ldl -lpthread libtbbmalloc.dylib -dynamiclib -install_name @rpath/libtbbmalloc_proxy.dylib -stdlib=libc++ -m64 -mmacosx-version-min=10.11 -Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"
    touch stan/lib/stan_math/lib/tbb/version_tbb_2020.3
    tbb_root="../tbb_2020.3" CXX="clang++" CC="clang" LDFLAGS='-Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"  ' '/Applications/Xcode.app/Contents/Developer/usr/bin/make' -C "stan/lib/stan_math/lib/tbb" -r -f "/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb_2020.3/build/Makefile.tbb" compiler=clang cfg=release stdver=c++1y  CXXFLAGS="-Wno-unknown-warning-option -Wno-deprecated-copy  "
    /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb_2020.3/build/Makefile.tbb:28: CONFIG: cfg=release arch=intel64 compiler=clang target=macos runtime=cc11.0.3_os10.15.7
    clang++ -o concurrent_hash_map.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/concurrent_hash_map.cpp
    clang++ -o concurrent_queue.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/concurrent_queue.cpp
    clang++ -o concurrent_vector.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/concurrent_vector.cpp
    clang++ -o dynamic_link.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/dynamic_link.cpp
    clang++ -o itt_notify.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/itt_notify.cpp
    clang++ -o cache_aligned_allocator.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/cache_aligned_allocator.cpp
    clang++ -o pipeline.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/pipeline.cpp
    clang++ -o queuing_mutex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/queuing_mutex.cpp
    clang++ -o queuing_rw_mutex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/queuing_rw_mutex.cpp
    clang++ -o reader_writer_lock.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/reader_writer_lock.cpp
    clang++ -o spin_rw_mutex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/spin_rw_mutex.cpp
    clang++ -o x86_rtm_rw_mutex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/x86_rtm_rw_mutex.cpp
    clang++ -o spin_mutex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/spin_mutex.cpp
    clang++ -o critical_section.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/critical_section.cpp
    clang++ -o mutex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/mutex.cpp
    clang++ -o recursive_mutex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/recursive_mutex.cpp
    clang++ -o condition_variable.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/condition_variable.cpp
    clang++ -o tbb_thread.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/tbb_thread.cpp
    clang++ -o concurrent_monitor.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/concurrent_monitor.cpp
    clang++ -o semaphore.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/semaphore.cpp
    clang++ -o private_server.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/private_server.cpp
    clang++ -o rml_tbb.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/rml/client/rml_tbb.cpp
    clang++ -o tbb_misc.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I. ../tbb_2020.3/src/tbb/tbb_misc.cpp
    clang++ -o tbb_misc_ex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/tbb_misc_ex.cpp
    clang++ -o task.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/task.cpp
    clang++ -o task_group_context.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/task_group_context.cpp
    clang++ -o governor.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/governor.cpp
    clang++ -o market.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/market.cpp
    clang++ -o arena.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/arena.cpp
    clang++ -o scheduler.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/scheduler.cpp
    clang++ -o observer_proxy.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/observer_proxy.cpp
    clang++ -o tbb_statistics.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/tbb_statistics.cpp
    clang++ -o tbb_main.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/tbb_main.cpp
    clang++ -o concurrent_vector_v2.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/old/concurrent_vector_v2.cpp
    clang++ -o concurrent_queue_v2.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/old/concurrent_queue_v2.cpp
    clang++ -o spin_rw_mutex_v2.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/old/spin_rw_mutex_v2.cpp
    clang++ -o task_v2.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/old/task_v2.cpp
    sh ../tbb_2020.3/build/generate_tbbvars.sh DY
    clang++ -E -x c++ ../tbb_2020.3/src/tbb/mac64-tbb-export.def -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include > tbb.def
    clang++ -fPIC -o libtbb.dylib concurrent_hash_map.o concurrent_queue.o concurrent_vector.o dynamic_link.o itt_notify.o cache_aligned_allocator.o pipeline.o queuing_mutex.o queuing_rw_mutex.o reader_writer_lock.o spin_rw_mutex.o x86_rtm_rw_mutex.o spin_mutex.o critical_section.o mutex.o recursive_mutex.o condition_variable.o tbb_thread.o concurrent_monitor.o semaphore.o private_server.o rml_tbb.o tbb_misc.o tbb_misc_ex.o task.o task_group_context.o governor.o market.o arena.o scheduler.o observer_proxy.o tbb_statistics.o tbb_main.o concurrent_vector_v2.o concurrent_queue_v2.o spin_rw_mutex_v2.o task_v2.o   -ldl -lpthread -dynamiclib -install_name @rpath/libtbb.dylib -stdlib=libc++ -m64 -mmacosx-version-min=10.11 -Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"   -Wl,-exported_symbols_list,tbb.def

    --- Compiling the main object file. This might take up to a minute. ---
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS         -c -o src/cmdstan/main.o src/cmdstan/main.cpp

    --- Compiling pre-compiled header. This might take a few seconds. ---
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS         -c stan/src/stan/model/model_header.hpp -o stan/src/stan/model/model_header.hpp.gch

    --- CmdStan v2.27.0 built ---
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS         -c -MT stan/src/stan/model/model_header.hpp.gch -MT stan/src/stan/model/model_header.d -MM -E -MG -MP -MF stan/src/stan/model/model_header.d stan/src/stan/model/model_header.hpp
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS         -c -MT src/cmdstan/main.o -MM -E -MG -MP -MF src/cmdstan/main.d src/cmdstan/main.cpp

    --- Translating Stan model to C++ code ---
    bin/stanc  --o=/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w/stan/splotch_stan_model.hpp /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w/stan/splotch_stan_model.stan

    --- Compiling, linking C++ code ---
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS         -c -include-pch stan/src/stan/model/model_header.hpp.gch -x c++ -o /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w/stan/splotch_stan_model.o /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w/stan/splotch_stan_model.hpp
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS               -Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"      /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w/stan/splotch_stan_model.o src/cmdstan/main.o        -Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"   stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_nvecserial.a stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_cvodes.a stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_idas.a stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_kinsol.a  stan/lib/stan_math/lib/tbb/libtbb.dylib stan/lib/stan_math/lib/tbb/libtbbmalloc.dylib stan/lib/stan_math/lib/tbb/libtbbmalloc_proxy.dylib -o /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w/stan/splotch_stan_model
    rm -f /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w/stan/splotch_stan_model.o
    copying /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w/stan/splotch_stan_model -> /Users/inzirio/Downloads/.venv/bin
    running install_egg_info
    running egg_info
    creating Splotch.egg-info
    writing Splotch.egg-info/PKG-INFO
    writing dependency_links to Splotch.egg-info/dependency_links.txt
    writing requirements to Splotch.egg-info/requires.txt
    writing top-level names to Splotch.egg-info/top_level.txt
    writing manifest file 'Splotch.egg-info/SOURCES.txt'
    reading manifest file 'Splotch.egg-info/SOURCES.txt'
    adding license file 'LICENSE'
    writing manifest file 'Splotch.egg-info/SOURCES.txt'
    Copying Splotch.egg-info to /Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/Splotch-0.0.1-py3.9.egg-info
    running install_scripts
    copying build/scripts-3.9/splotch -> /Users/inzirio/Downloads/.venv/bin
    copying build/scripts-3.9/splotch_generate_input_files -> /Users/inzirio/Downloads/.venv/bin
    copying build/scripts-3.9/splotch_prepare_count_files -> /Users/inzirio/Downloads/.venv/bin
    changing mode of /Users/inzirio/Downloads/.venv/bin/splotch to 755
    changing mode of /Users/inzirio/Downloads/.venv/bin/splotch_generate_input_files to 755
    changing mode of /Users/inzirio/Downloads/.venv/bin/splotch_prepare_count_files to 755
    writing list of installed files to '/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-record-38egx5qa/install-record.txt'
    Running setup.py install for Splotch ... done
Successfully installed Splotch-0.0.1
% pip install -v --no-deps --force-reinstall --upgrade --install-option="--stan" git+https://git@github.com/tare/Splotch.git

/Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/pip/_internal/commands/install.py:232: UserWarning: Disabling all use of wheels due to the use of --build-option / --global-option / --install-option.
  cmdoptions.check_install_build_global(options)
Using pip 21.1.3 from /Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/pip (python 3.9)
Non-user install because user site-packages disabled
Created temporary directory: /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-ephem-wheel-cache-wd21695h
Created temporary directory: /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-tracker-oy0jbzpy
Initialized build tracking at /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-tracker-oy0jbzpy
Created build tracker: /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-tracker-oy0jbzpy
Entered build tracker: /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-tracker-oy0jbzpy
Created temporary directory: /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-install-jkfdgl5b
Collecting git+https://****@github.com/tare/Splotch.git
  Created temporary directory: /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w
  Cloning https://****@github.com/tare/Splotch.git to /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w
  Running command git clone -q 'https://****@github.com/tare/Splotch.git' /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w
  Added git+https://****@github.com/tare/Splotch.git to build tracker '/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-tracker-oy0jbzpy'
    Running setup.py (path:/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w/setup.py) egg_info for package from git+https://****@github.com/tare/Splotch.git
    Created temporary directory: /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-pip-egg-info-sc100it0
    Running command python setup.py egg_info
    running egg_info
    creating /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-pip-egg-info-sc100it0/Splotch.egg-info
    writing /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-pip-egg-info-sc100it0/Splotch.egg-info/PKG-INFO
    writing dependency_links to /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-pip-egg-info-sc100it0/Splotch.egg-info/dependency_links.txt
    writing requirements to /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-pip-egg-info-sc100it0/Splotch.egg-info/requires.txt
    writing top-level names to /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-pip-egg-info-sc100it0/Splotch.egg-info/top_level.txt
    writing manifest file '/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-pip-egg-info-sc100it0/Splotch.egg-info/SOURCES.txt'
    reading manifest file '/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-pip-egg-info-sc100it0/Splotch.egg-info/SOURCES.txt'
    adding license file 'LICENSE'
    writing manifest file '/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-pip-egg-info-sc100it0/Splotch.egg-info/SOURCES.txt'
  Source in /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w has version 0.0.1, which satisfies requirement Splotch==0.0.1 from git+https://****@github.com/tare/Splotch.git
  Removed Splotch==0.0.1 from git+https://****@github.com/tare/Splotch.git from build tracker '/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-tracker-oy0jbzpy'
Created temporary directory: /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-unpack-1s84j_to
Skipping wheel build for Splotch, due to binaries being disabled for it.
Installing collected packages: Splotch
  Attempting uninstall: Splotch
    Found existing installation: Splotch 0.0.1
    Uninstalling Splotch-0.0.1:
      Created temporary directory: /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-uninstall-3zar1_2v
      Removing file or directory /Users/inzirio/Downloads/.venv/bin/splotch
      Removing file or directory /Users/inzirio/Downloads/.venv/bin/splotch_generate_input_files
      Removing file or directory /Users/inzirio/Downloads/.venv/bin/splotch_prepare_count_files
      Created temporary directory: /Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/~plotch-0.0.1-py3.9.egg-info
      Removing file or directory /Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/Splotch-0.0.1-py3.9.egg-info
      Created temporary directory: /Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/~plotch
      Removing file or directory /Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/splotch/
      Successfully uninstalled Splotch-0.0.1
  Created temporary directory: /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-record-38egx5qa
    Running command /Users/inzirio/Downloads/.venv/bin/python3.9 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w/setup.py'"'"'; __file__='"'"'/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-record-38egx5qa/install-record.txt --single-version-externally-managed --compile --install-headers /Users/inzirio/Downloads/.venv/include/site/python3.9/Splotch --stan
    running install
    running build
    running build_py
    creating build
    creating build/lib
    creating build/lib/splotch
    copying splotch/__init__.py -> build/lib/splotch
    copying splotch/utils.py -> build/lib/splotch
    running build_scripts
    creating build/scripts-3.9
    copying and adjusting bin/splotch_prepare_count_files -> build/scripts-3.9
    copying and adjusting bin/splotch_generate_input_files -> build/scripts-3.9
    copying bin/splotch -> build/scripts-3.9
    changing mode of build/scripts-3.9/splotch_prepare_count_files from 644 to 755
    changing mode of build/scripts-3.9/splotch_generate_input_files from 644 to 755
    changing mode of build/scripts-3.9/splotch from 644 to 755
    running install_lib
    creating /Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/splotch
    copying build/lib/splotch/__init__.py -> /Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/splotch
    copying build/lib/splotch/utils.py -> /Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/splotch
    byte-compiling /Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/splotch/__init__.py to __init__.cpython-39.pyc
    byte-compiling /Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/splotch/utils.py to utils.cpython-39.pyc
    running install_data
    cp bin/mac-stanc bin/stanc
    chmod +x bin/stanc
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS         -c -fvisibility=hidden -o bin/cmdstan/stansummary.o src/cmdstan/stansummary.cpp
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS               -Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"      bin/cmdstan/stansummary.o        -Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"   -o bin/stansummary
    ld: warning: directory not found for option '-L/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb'
    ld: warning: directory not found for option '-L/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb'
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS         -c -fvisibility=hidden -o bin/cmdstan/print.o src/cmdstan/print.cpp
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS               -Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"      bin/cmdstan/print.o        -Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"   -o bin/print
    ld: warning: directory not found for option '-L/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb'
    ld: warning: directory not found for option '-L/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb'
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS         -c -fvisibility=hidden -o bin/cmdstan/diagnose.o src/cmdstan/diagnose.cpp
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS               -Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"      bin/cmdstan/diagnose.o        -Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"   -o bin/diagnose
    ld: warning: directory not found for option '-L/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb'
    ld: warning: directory not found for option '-L/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb'
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/nvector/serial/nvector_serial.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/nvector/serial/nvector_serial.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_math.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_math.o
    ar -rs stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_nvecserial.a stan/lib/stan_math/lib/sundials_5.7.0/src/nvector/serial/nvector_serial.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_math.o
    ar: creating archive stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_nvecserial.a
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodea.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodea.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodea_io.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodea_io.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_bandpre.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_bandpre.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_bbdpre.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_bbdpre.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_diag.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_diag.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_direct.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_direct.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_io.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_io.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_ls.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_ls.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls_sim.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls_sim.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls_stg.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls_stg.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls_stg1.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls_stg1.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_spils.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_spils.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_band.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_band.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_dense.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_dense.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_direct.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_direct.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_futils.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_futils.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_iterative.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_iterative.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_linearsolver.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_linearsolver.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_matrix.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_matrix.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_memory.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_memory.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nonlinearsolver.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nonlinearsolver.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nvector.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nvector.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nvector_senswrapper.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nvector_senswrapper.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_version.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_version.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sunmatrix/band/sunmatrix_band.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sunmatrix/band/sunmatrix_band.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sunmatrix/dense/sunmatrix_dense.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sunmatrix/dense/sunmatrix_dense.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sunlinsol/band/sunlinsol_band.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sunlinsol/band/sunlinsol_band.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sunlinsol/dense/sunlinsol_dense.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sunlinsol/dense/sunlinsol_dense.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sunnonlinsol/newton/sunnonlinsol_newton.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sunnonlinsol/newton/sunnonlinsol_newton.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.o
    ar -rs stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_cvodes.a stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodea.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodea_io.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_bandpre.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_bbdpre.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_diag.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_direct.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_io.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_ls.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls_sim.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls_stg.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_nls_stg1.o stan/lib/stan_math/lib/sundials_5.7.0/src/cvodes/cvodes_spils.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_band.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_dense.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_direct.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_futils.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_iterative.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_linearsolver.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_math.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_matrix.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_memory.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nonlinearsolver.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nvector.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nvector_senswrapper.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_version.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunmatrix/band/sunmatrix_band.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunmatrix/dense/sunmatrix_dense.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunlinsol/band/sunlinsol_band.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunlinsol/dense/sunlinsol_dense.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunnonlinsol/newton/sunnonlinsol_newton.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.o
    ar: creating archive stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_cvodes.a
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idaa.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idaa.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idaa_io.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idaa_io.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_bbdpre.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_bbdpre.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_direct.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_direct.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_ic.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_ic.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_io.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_io.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_ls.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_ls.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_nls.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_nls.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_nls_sim.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_nls_sim.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_nls_stg.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_nls_stg.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_spils.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_spils.o
    ar -rs stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_idas.a stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idaa.o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idaa_io.o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas.o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_bbdpre.o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_direct.o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_ic.o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_io.o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_ls.o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_nls.o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_nls_sim.o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_nls_stg.o stan/lib/stan_math/lib/sundials_5.7.0/src/idas/idas_spils.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_band.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_dense.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_direct.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_futils.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_iterative.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_linearsolver.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_math.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_matrix.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_memory.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nonlinearsolver.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nvector.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nvector_senswrapper.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_version.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunmatrix/band/sunmatrix_band.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunmatrix/dense/sunmatrix_dense.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunlinsol/band/sunlinsol_band.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunlinsol/dense/sunlinsol_dense.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunnonlinsol/newton/sunnonlinsol_newton.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.o
    ar: creating archive stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_idas.a
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_bbdpre.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_bbdpre.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_direct.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_direct.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_io.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_io.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_ls.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_ls.o
    clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_5.7.0/include -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_5.7.0/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_spils.c -o stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_spils.o
    ar -rs stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_kinsol.a stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol.o stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_bbdpre.o stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_direct.o stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_io.o stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_ls.o stan/lib/stan_math/lib/sundials_5.7.0/src/kinsol/kinsol_spils.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_band.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_dense.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_direct.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_futils.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_iterative.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_linearsolver.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_math.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_matrix.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_memory.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nonlinearsolver.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nvector.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_nvector_senswrapper.o stan/lib/stan_math/lib/sundials_5.7.0/src/sundials/sundials_version.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunmatrix/band/sunmatrix_band.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunmatrix/dense/sunmatrix_dense.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunlinsol/band/sunlinsol_band.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunlinsol/dense/sunlinsol_dense.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunnonlinsol/newton/sunnonlinsol_newton.o stan/lib/stan_math/lib/sundials_5.7.0/src/sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.o
    ar: creating archive stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_kinsol.a
    touch stan/lib/stan_math/lib/tbb/tbb-make-check
    tbb_root="../tbb_2020.3" CXX="clang++" CC="clang" LDFLAGS='-Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"  ' '/Applications/Xcode.app/Contents/Developer/usr/bin/make' -C "stan/lib/stan_math/lib/tbb" -r -f "/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb_2020.3/build/Makefile.tbbmalloc" compiler=clang cfg=release stdver=c++1y malloc CXXFLAGS="-Wno-unknown-warning-option -Wno-deprecated-copy  "
    clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11   -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I../tbb_2020.3/src/tbbmalloc -I../tbb_2020.3/src/tbbmalloc ../tbb_2020.3/src/tbbmalloc/backend.cpp
    clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11   -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I../tbb_2020.3/src/tbbmalloc -I../tbb_2020.3/src/tbbmalloc ../tbb_2020.3/src/tbbmalloc/large_objects.cpp
    clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11   -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I../tbb_2020.3/src/tbbmalloc -I../tbb_2020.3/src/tbbmalloc ../tbb_2020.3/src/tbbmalloc/backref.cpp
    clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11   -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I../tbb_2020.3/src/tbbmalloc -I../tbb_2020.3/src/tbbmalloc ../tbb_2020.3/src/tbbmalloc/tbbmalloc.cpp
    clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11   -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -o itt_notify_malloc.o -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/itt_notify.cpp
    sh ../tbb_2020.3/build/version_info_macos.sh clang++ -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -Wall -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1  -std=c++1y -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include >version_string.ver
    clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11   -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I../tbb_2020.3/src/tbbmalloc -I../tbb_2020.3/src/tbbmalloc -I. ../tbb_2020.3/src/tbbmalloc/frontend.cpp
    clang++ -E -x c++ ../tbb_2020.3/src/tbbmalloc/mac64-tbbmalloc-export.def -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -Wall -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1  -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1  -Wno-non-virtual-dtor -Wno-dangling-else -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include > tbbmalloc.def
    clang -fPIC -o libtbbmalloc.dylib backend.o large_objects.o backref.o  tbbmalloc.o  itt_notify_malloc.o frontend.o  -ldl -lpthread -dynamiclib -install_name @rpath/libtbbmalloc.dylib -stdlib=libc++ -m64 -mmacosx-version-min=10.11 -Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"   -Wl,-exported_symbols_list,tbbmalloc.def
    clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -Wall -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1  -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -D__TBBMALLOC_BUILD=1 -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I../tbb_2020.3/src/tbbmalloc -I../tbb_2020.3/src/tbbmalloc ../tbb_2020.3/src/tbbmalloc/proxy.cpp
    clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -Wall -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1  -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -D__TBBMALLOC_BUILD=1 -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I../tbb_2020.3/src/tbbmalloc -I../tbb_2020.3/src/tbbmalloc ../tbb_2020.3/src/tbbmalloc/tbb_function_replacement.cpp
    clang++ -fPIC -o libtbbmalloc_proxy.dylib proxy.o tbb_function_replacement.o  -ldl -lpthread libtbbmalloc.dylib -dynamiclib -install_name @rpath/libtbbmalloc_proxy.dylib -stdlib=libc++ -m64 -mmacosx-version-min=10.11 -Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"
    touch stan/lib/stan_math/lib/tbb/version_tbb_2020.3
    tbb_root="../tbb_2020.3" CXX="clang++" CC="clang" LDFLAGS='-Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"  ' '/Applications/Xcode.app/Contents/Developer/usr/bin/make' -C "stan/lib/stan_math/lib/tbb" -r -f "/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb_2020.3/build/Makefile.tbb" compiler=clang cfg=release stdver=c++1y  CXXFLAGS="-Wno-unknown-warning-option -Wno-deprecated-copy  "
    /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb_2020.3/build/Makefile.tbb:28: CONFIG: cfg=release arch=intel64 compiler=clang target=macos runtime=cc11.0.3_os10.15.7
    clang++ -o concurrent_hash_map.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/concurrent_hash_map.cpp
    clang++ -o concurrent_queue.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/concurrent_queue.cpp
    clang++ -o concurrent_vector.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/concurrent_vector.cpp
    clang++ -o dynamic_link.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/dynamic_link.cpp
    clang++ -o itt_notify.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/itt_notify.cpp
    clang++ -o cache_aligned_allocator.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/cache_aligned_allocator.cpp
    clang++ -o pipeline.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/pipeline.cpp
    clang++ -o queuing_mutex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/queuing_mutex.cpp
    clang++ -o queuing_rw_mutex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/queuing_rw_mutex.cpp
    clang++ -o reader_writer_lock.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/reader_writer_lock.cpp
    clang++ -o spin_rw_mutex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/spin_rw_mutex.cpp
    clang++ -o x86_rtm_rw_mutex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/x86_rtm_rw_mutex.cpp
    clang++ -o spin_mutex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/spin_mutex.cpp
    clang++ -o critical_section.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/critical_section.cpp
    clang++ -o mutex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/mutex.cpp
    clang++ -o recursive_mutex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/recursive_mutex.cpp
    clang++ -o condition_variable.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/condition_variable.cpp
    clang++ -o tbb_thread.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/tbb_thread.cpp
    clang++ -o concurrent_monitor.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/concurrent_monitor.cpp
    clang++ -o semaphore.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/semaphore.cpp
    clang++ -o private_server.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/private_server.cpp
    clang++ -o rml_tbb.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/rml/client/rml_tbb.cpp
    clang++ -o tbb_misc.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I. ../tbb_2020.3/src/tbb/tbb_misc.cpp
    clang++ -o tbb_misc_ex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/tbb_misc_ex.cpp
    clang++ -o task.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/task.cpp
    clang++ -o task_group_context.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/task_group_context.cpp
    clang++ -o governor.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/governor.cpp
    clang++ -o market.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/market.cpp
    clang++ -o arena.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/arena.cpp
    clang++ -o scheduler.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/scheduler.cpp
    clang++ -o observer_proxy.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/observer_proxy.cpp
    clang++ -o tbb_statistics.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/tbb_statistics.cpp
    clang++ -o tbb_main.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/tbb_main.cpp
    clang++ -o concurrent_vector_v2.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/old/concurrent_vector_v2.cpp
    clang++ -o concurrent_queue_v2.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/old/concurrent_queue_v2.cpp
    clang++ -o spin_rw_mutex_v2.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/old/spin_rw_mutex_v2.cpp
    clang++ -o task_v2.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/old/task_v2.cpp
    sh ../tbb_2020.3/build/generate_tbbvars.sh DY
    clang++ -E -x c++ ../tbb_2020.3/src/tbb/mac64-tbb-export.def -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include > tbb.def
    clang++ -fPIC -o libtbb.dylib concurrent_hash_map.o concurrent_queue.o concurrent_vector.o dynamic_link.o itt_notify.o cache_aligned_allocator.o pipeline.o queuing_mutex.o queuing_rw_mutex.o reader_writer_lock.o spin_rw_mutex.o x86_rtm_rw_mutex.o spin_mutex.o critical_section.o mutex.o recursive_mutex.o condition_variable.o tbb_thread.o concurrent_monitor.o semaphore.o private_server.o rml_tbb.o tbb_misc.o tbb_misc_ex.o task.o task_group_context.o governor.o market.o arena.o scheduler.o observer_proxy.o tbb_statistics.o tbb_main.o concurrent_vector_v2.o concurrent_queue_v2.o spin_rw_mutex_v2.o task_v2.o   -ldl -lpthread -dynamiclib -install_name @rpath/libtbb.dylib -stdlib=libc++ -m64 -mmacosx-version-min=10.11 -Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"   -Wl,-exported_symbols_list,tbb.def

    --- Compiling the main object file. This might take up to a minute. ---
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS         -c -o src/cmdstan/main.o src/cmdstan/main.cpp

    --- Compiling pre-compiled header. This might take a few seconds. ---
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS         -c stan/src/stan/model/model_header.hpp -o stan/src/stan/model/model_header.hpp.gch

    --- CmdStan v2.27.0 built ---
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS         -c -MT stan/src/stan/model/model_header.hpp.gch -MT stan/src/stan/model/model_header.d -MM -E -MG -MP -MF stan/src/stan/model/model_header.d stan/src/stan/model/model_header.hpp
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS         -c -MT src/cmdstan/main.o -MM -E -MG -MP -MF src/cmdstan/main.d src/cmdstan/main.cpp

    --- Translating Stan model to C++ code ---
    bin/stanc  --o=/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w/stan/splotch_stan_model.hpp /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w/stan/splotch_stan_model.stan

    --- Compiling, linking C++ code ---
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS         -c -include-pch stan/src/stan/model/model_header.hpp.gch -x c++ -o /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w/stan/splotch_stan_model.o /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w/stan/splotch_stan_model.hpp
    clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include   -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.75.0 -I stan/lib/stan_math/lib/sundials_5.7.0/include    -DBOOST_DISABLE_ASSERTS               -Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"      /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w/stan/splotch_stan_model.o src/cmdstan/main.o        -Wl,-L,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/tmp231eqdl_/cmdstan-2.27.0/stan/lib/stan_math/lib/tbb"   stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_nvecserial.a stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_cvodes.a stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_idas.a stan/lib/stan_math/lib/sundials_5.7.0/lib/libsundials_kinsol.a  stan/lib/stan_math/lib/tbb/libtbb.dylib stan/lib/stan_math/lib/tbb/libtbbmalloc.dylib stan/lib/stan_math/lib/tbb/libtbbmalloc_proxy.dylib -o /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w/stan/splotch_stan_model
    rm -f /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w/stan/splotch_stan_model.o
    copying /private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-req-build-98s6059w/stan/splotch_stan_model -> /Users/inzirio/Downloads/.venv/bin
    running install_egg_info
    running egg_info
    creating Splotch.egg-info
    writing Splotch.egg-info/PKG-INFO
    writing dependency_links to Splotch.egg-info/dependency_links.txt
    writing requirements to Splotch.egg-info/requires.txt
    writing top-level names to Splotch.egg-info/top_level.txt
    writing manifest file 'Splotch.egg-info/SOURCES.txt'
    reading manifest file 'Splotch.egg-info/SOURCES.txt'
    adding license file 'LICENSE'
    writing manifest file 'Splotch.egg-info/SOURCES.txt'
    Copying Splotch.egg-info to /Users/inzirio/Downloads/.venv/lib/python3.9/site-packages/Splotch-0.0.1-py3.9.egg-info
    running install_scripts
    copying build/scripts-3.9/splotch -> /Users/inzirio/Downloads/.venv/bin
    copying build/scripts-3.9/splotch_generate_input_files -> /Users/inzirio/Downloads/.venv/bin
    copying build/scripts-3.9/splotch_prepare_count_files -> /Users/inzirio/Downloads/.venv/bin
    changing mode of /Users/inzirio/Downloads/.venv/bin/splotch to 755
    changing mode of /Users/inzirio/Downloads/.venv/bin/splotch_generate_input_files to 755
    changing mode of /Users/inzirio/Downloads/.venv/bin/splotch_prepare_count_files to 755
    writing list of installed files to '/private/var/folders/3b/2z91xnmx6vq99jc862r_5xn40000gn/T/pip-record-38egx5qa/install-record.txt'
    Running setup.py install for Splotch ... done
Successfully installed Splotch-0.0.1

Tarmo Äijö · Answer 3 · Thu Sep 23 2021 20:16:16 GMT+0800 (China Standard Time)

splotch_stan_model is not in /Users/inzirio/Downloads/.venv/bin?

Please try the second installation method to compile the splotch_stan_model binary. This installation method is easier to debug.

dario righelli · Answer 4 · Thu Sep 23 2021 22:53:19 GMT+0800 (China Standard Time)

ok thanks, I found the binary for the splotch_stan_model.

But when trying to run:
splotch -g 3661 -n 200 -c 4 -b splotch_stan_model -d data_three -o output_three

I get this:

dyld: Library not loaded: @rpathdyld: Library not loaded: @rpath/libtbb.dylib
  Referenced from: /Users/inzirio/Downloads/.venv/dyld: Library not loaded: @rpathbin/splotch_stan_model
  Reason:/libtbb.dylib
  Referenced from: image not found
 /Users/inzirio/Downloads/.venv/bin/splotch_stan_model
  Reason: image not found
/libtbb.dylib
  Referenced from: /Users/inzirio/Downloads/.venv/bin/splotch_stan_model
  Reason: image not found
dyld: Library not loaded: @rpath/libtbb.dylib
  Referenced from: /Users/inzirio/Downloads/.venv/bin/splotch_stan_model
  Reason: image not found
/Users/inzirio/Downloads/.venv/bin/splotch: line 124: 10488 Abort trap: 6           "$BINARY" sample num_samples="$NUM_SAMPLES" num_warmup="$NUM_SAMPLES" random id="$CHAIN" data file="$DATA_DIRECTORY"/"$DIRECTORY"/data_"$GENE".R output file="$OUTPUT_DIRECTORY"/"$DIRECTORY"/output_"$GENE"_"$CHAIN".csv refresh=10
/Users/inzirio/Downloads/.venv/bin/splotch: line 124: 10484 Abort trap: 6           "$BINARY" sample num_samples="$NUM_SAMPLES" num_warmup="$NUM_SAMPLES" random id="$CHAIN" data file="$DATA_DIRECTORY"/"$DIRECTORY"/data_"$GENE".R output file="$OUTPUT_DIRECTORY"/"$DIRECTORY"/output_"$GENE"_"$CHAIN".csv refresh=10
/Users/inzirio/Downloads/.venv/bin/splotch: line 124: 10487 Abort trap: 6           "$BINARY" sample num_samples="$NUM_SAMPLES" num_warmup="$NUM_SAMPLES" random id="$CHAIN" data file="$DATA_DIRECTORY"/"$DIRECTORY"/data_"$GENE".R output file="$OUTPUT_DIRECTORY"/"$DIRECTORY"/output_"$GENE"_"$CHAIN".csv refresh=10
Error: Stan run failed!
Error: Stan run failed!
Error: Stan run failed!
/Users/inzirio/Downloads/.venv/bin/splotch: line 124: 10485 Abort trap: 6           "$BINARY" sample num_samples="$NUM_SAMPLES" num_warmup="$NUM_SAMPLES" random id="$CHAIN" data file="$DATA_DIRECTORY"/"$DIRECTORY"/data_"$GENE".R output file="$OUTPUT_DIRECTORY"/"$DIRECTORY"/output_"$GENE"_"$CHAIN".csv refresh=10
Error: Stan run failed!

Just for completeness, I'm running the first two instructions in the updated python tutorial...

Tarmo Äijö · Answer 5 · Thu Sep 23 2021 23:14:28 GMT+0800 (China Standard Time)

Thanks! It looks like something is going wrong with the binary. Please try the second installation method. First, install the Splotch module without worrying about the Stan code. Second, install CmdStan and compile the splotch_stan_model binary. Then, run splotch by either providing the full path to the splotch_stan_model binary or place the binary in some directory that is in your PATH.

dario righelli · Answer 6 · Thu Sep 23 2021 23:28:22 GMT+0800 (China Standard Time)

I'm trying the second approach, but I got a new error during the stan compilation:

From the cmdstan folder I'm running:

% make ~/Downloads/splotch/stan/splotch_stan_model.stan
make: Nothing to be done for `~/Downloads/splotch/stan/splotch_stan_model.stan'.

Tarmo Äijö · Answer 7 · Thu Sep 23 2021 23:29:54 GMT+0800 (China Standard Time)

Please leave out the file type extension '.stan'.

Tarmo

dario righelli · Answer 8 · Thu Sep 23 2021 23:30:56 GMT+0800 (China Standard Time)

ooops sorry!

dario righelli · Answer 9 · Thu Sep 23 2021 23:50:03 GMT+0800 (China Standard Time)

Thanks, second installation approach worked, I just had to rightly specify the stan_model path in the second command.

splotch -g 3661 -n 200 -c 4 -b stan/splotch_stan_model -d data_three -o output_three

I'm going to close the issue, I'll get in touch with you in case of further problems :)