Strong Lab, National Jewish Health, University of Colorado, Denver (Strong-Lab)

Strong Lab, National Jewish Health, University of Colorado, Denver

Strong-Lab

Geek Repo

Location:Denver, Colorado

Home Page:www.StrongLab.org

Github PK Tool:Github PK Tool

Strong Lab, National Jewish Health, University of Colorado, Denver's repositories

VirKraken

Kraken extension to identify viral contigs

Language:PythonLicense:MITStargazers:9Issues:2Issues:2

Phybrid

A hybrid gene content and k-mer feature viral metagenomic contig identifier

Language:Jupyter NotebookLicense:MITStargazers:2Issues:2Issues:0

Prophage_in_NTM

This repository contains the data and methods for characterization of integrated prophages within different species of clinical non-tuberculous mycobacterial genomes

Language:Jupyter NotebookLicense:MITStargazers:1Issues:2Issues:0

Viral_Classification_in_Metagenomics

This repository contains the data and scripts used in Simulation Study of Viral Contiguous Sequence Identification Tools

Language:Jupyter NotebookLicense:MITStargazers:1Issues:2Issues:3
Language:Jupyter NotebookLicense:MITStargazers:1Issues:2Issues:0

bioconda-recipes

Conda recipes for the bioconda channel.

Language:ShellStargazers:0Issues:1Issues:0

extract_sequence_range

A script that provides several options for extracting a range of characters from a FASTA file

Language:PythonStargazers:0Issues:0Issues:0

GISAID_Pipeline_Functions

Scripts used to determine variants in SARS-CoV-2 Sequences from the Global Sharing of All Influenza Data (GISAID) database.

Language:PythonStargazers:0Issues:0Issues:0
Language:Jupyter NotebookLicense:MITStargazers:0Issues:2Issues:0
Stargazers:0Issues:1Issues:0

wiki

How to's

Stargazers:0Issues:1Issues:0