Inline configuration parameters are not used with some commands
Melkaz opened this issue · comments
Hello !
Describe the bug
Inline configuration parameters are not used when invoking some commands, such as batches
or status
It seems to affect the batch_interval_mins
parameter.
To Reproduce
Call:
oliver \
--cromwell-server https://aks-sciworkflow.sophiagenetics.com/cromwell/ \
--cromwell-api-version v1 \
--batch-interval-mins 2 \
batches
Output:
[E 220211 16:09:03 errors:28] The following required arguments are missing: batch_interval_mins!
We recommend you run 'oliver configure' to ensure all required arguments are cached in the oliver configuration file.
If you choose not to do this, you will need to pass their respective flags on the command line.
Expected behavior
Show job batches
Thanks for your help !
Hi @Melkaz, seems this issue has been resolved by the above PR. As such, I'm going to close the issue. Let us know if you have any problems with the latest version!