Alex Stivala's repositories
EstimNetDirected
Equilibrium Expectation for ERGM parameter estimation for large networks
culture_cooperation
Culture and cooperation in a spatial public goods game
paralleldp
Lock-free parallel dynamic programming
traffic_assignment
User equilibrium traffic assignment and models for scheduling road upgrades
axelrod_qrphase
Another phase transition in the Axelrod model
bionetworks_estimations
Data and scripts for "Testing biological network motif significance with exponential random graph models"
geodesic_cycles
Code, scripts, and data for "Geodesic cycle length distributions in delusional and other social networks"
gpu_hashtables
Lock-free Concurrent Hash Tables and Parallel Dynamic Programming on the GPU
axelrod_ultrametric
Ultrametric distribution of culture vectors in an extended Axelrod model of cultural dissemination
cuda_satabsearch
Fast and accurate protein substructure searching with simulated annealing and GPUs
network_times
Python code for computing time distribution of arcs closing open two-paths into transitive or cyclic triads
AcademicWebsite
Files (mostly PDF preprints and slides) for academic website
ALAAM_sampling
Scripts for Using sampled network data with the Autologistic Actor Attribute Model
diversity_community
Diversity and Community Can Co-exist
qptabsearch
Tableau-based protein substructure search using quadratic programming
waffles
A toolkit of machine learning algorithms.