Srikanth Krishnamoorthy's repositories
Ath_Heat_Hi-C
Bioinformatic analysis of RNA-Seq, WGBS, and Hi-C in Arabidopsis
Awesome-Bioinformatics
A curated list of awesome Bioinformatics libraries and software.
awesome-nextflow
A curated list of nextflow based pipelines
awesome-reproducible-research
A curated list of reproducible research case studies, projects, tutorials, and media
c9-python-getting-started
Sample code for Channel 9 Python for Beginners course
Enrich-analysis.pl
Enrich analysis of differentially expressed genes.
genomics_general
General tools for genomic analyses.
getting-started-with-genomics-tools-and-resources
Unix, R and python tools for genomics and data science
learning-bioinformatics-at-home
resources for learning bioinformatics
learning_vcf_file
Learning the Variant Call Format
libflagstats
Efficient C functions to compute the summary statistics (flagstats) for sequencing read sets.
lockdown-learning
Scripts written for my Bioinformatics-along on YouTube: https://www.youtube.com/playlist?list=PLzfP3sCXUnxEu5S9oXni1zmc1sjYmT1L9
MDS_UBC_syllabus
Public documents for the Master of Data Science program at the University of British Columbia
MicrobiomeBestPracticeReview
Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing
Online_R_learning
Online R learning project for advanced undergrads during the COVID-19 pandemic
practicalAI
📚 A practical approach to machine learning.
100-days-of-python
🐍 The Complete Python Pro Bootcamp for 2021
Animal-Breeding-Plans
"Animal Breeding Plans, Third Edition, Sixth Printing" by Professor Jay L. Lush of Iowa State University.
awesome-ggplot2
A curated list of awesome ggplot2 tutorials, packages etc.
computer-science
:mortar_board: Path to a free self-taught education in Computer Science!
dna-seq-gatk-variant-calling
This Snakemake pipeline implements the GATK best-practices workflow
github-slideshow
A robot powered training repository :robot:
husonlab
Workshop