snardeli's repositories
chipseq
ChIP-seq peak-calling, QC and differential analysis pipeline.
datasharing
The Leek group guide to data sharing
github-slideshow
A robot powered training repository :robot:
Meena_et_al_2024
About Supplementary code for the manuscript: "Genes hosting antisense transcripts are stress responsive and govern the cold acclimation in Arabidopsis thaliana"
Nardeli_et_al_2023
Analysis and documents relative to the Nardeli et al., 2023 manuscript.
PreprocessingJournalClub
HTS preprocessing journal club
RNA-Seq-workflow-Differential-Expression
This is an adaptation of Charlotte Soneson's RNA-Seq teaching material, originally given at the EBI in April 2019
scraps
Single-cell RNA Processing Software
statements
Successful Job Applications and Grants
test_repo_baltimore
This is a test repo for R Ladies Baltimore
wigglescout
Explore and visualize genomics bigWig data.
workshop-epigenomics-RTDs
workshop website on readthedocs
workshop-reproducible-research
NBIS/ELIXIR course: Tools for Reproducible Research