snakemake-workflows / rna-seq-star-deseq2

RNA-seq workflow using STAR and DESeq2

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snakemake version 5.9.1 raised an error with get_deseq2_threads called as a pointer

ginolhac opened this issue · comments

this line:

threads: get_deseq2_threads

raised this error snakemake version 5.9.1

int() argument must be a string, a bytes-like object or a number, not 'function'

the error is not present with version 5.5.1

Replacing by threads: get_deseq2_threads() silences the error

Closed by #62