Svetlana Lyalina's repositories
optimize_over_tree
A mixed integer programming solution to the maximum phylogenetic diversity problem
Language:PythonApache-2.0000
search_16S_py
A simple python implementation of the 16S finding procedure described in https://doi.org/10.1101/124131
Language:PythonApache-2.0000
metagenomics_pipeline_with_sciluigi
Trying out Luigi/SciLuigi to hopefully write better pipelines, replacing clunky shell scripts
Language:Python000
Mouse_IBD_2017_paper_supporting_code
Supporting code for https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5585689/