Sam Lambrechts's repositories
atlas
ATLAS - Three commands to start analyzing your metagenome data
Language:PythonBSD-3-Clause000
MAG_Snakemake_wf
Recovery of prokaryotic genomes from shotgun metagenomic sequencing data
Language:HTMLNOASSERTION000
magscreen
Snakemake workflow to screen a set of genomes (e.g., MAGs) against an existing genome database and identify novel species
Language:PythonMIT000
metabaR
metabaR is an R package to curate and visualise DNA metabarcoding data after basic bioinformatics analyses.
Language:HTML000
microfiltR
accessory functions for processing microbial community data
Language:RMIT000
virsearch
Snakemake workflow to detect and classify viruses in metagenome assemblies.
Language:PythonMIT000