Compi convenience scripts
This repository contains different convenience scripts for Compi (https://www.sing-group.org/compi/).
compi-list-param-names.sh
: produces a list with the parameter names present in a given pipeline file.compi-list-task-names.sh
: produces a list with the task names present in a given pipeline file.compi-log-finished-tasks.sh
: produces a list with the names of the tasks that have been logged as finished.compi-log-started-tasks.sh
: produces a list with the names of the tasks that have been logged as started.compi-metadata-skeleton.sh
: produces a metadata section for all the tasks present in a given pipeline file.