- Harmonic bonds
- Harmonic angles
- Lennar-Jones pair interactions
- DPD
- Hybrid particle-field molecular dynamics -> with classical interactions and Gaussian convolution of atomic denisities with FFT
- Shear flow (Non-eq.)
- Thermostats: Berendsen, Andersen, Lowe-Andersen
- Different particle types
- Multi particle collision dynamics
- RDF
- MSD
- E2E autocorrelation & relaxation time (polymers)
- Viscosity calculation
import Pkg; Pkg.add("Formatting"); Pkg.add("Distributions"); Pkg.add("ProgressMeter"); Pkg.add("Debugger"); Pkg.add("Statistics"); Pkg.add("LinearAlgebra"); Pkg.add("Random"); Pkg.add("FFTW")
You will need an input file, typically called input.data and a control file, typically named control.txt. Run with the following command:
julia /your/path/MPMDP/source/start.jl