ShokofehVS

adam

ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.

biclustlib

A Python library of biclustering algorithms, evaluation measures and datasets.

Ecual

Ecual performs computations over encrypted data by Zama's variant of TFHE in Python for Cheng and Church Algorithm (CCA)

FastQC

A quality control analysis tool for high throughput sequencing data

Flower4Pyfhel

Towards Complementing Federated Learning by Homomorphic Encryption

FunBic-CCA

Functional secret sharing for biclustering algorithms (FunBic) -- Cheng and Church Algorithm (CCA) over gene expression data sets

Intrusion_detection_UNSW_NB15

REMBic-CCA

Explanatory Analysis of Biclustering Algorithm -- CCA over EpiRegioDB

SecBic-BCCA

A series of homomorphically biclustering algorithms (SecBic) -- Bi-Correlation Clustering Algorithm -- using CKKS scheme with Pyfhel Libary over gene expression data sets

SecBic-CCA

SecBic-CCA: Secured Biclusterings - Cheng and Church Algorithm using CKKS scheme with Pyfhel Libary over gene expression data sets.

SeCCA

Secured Cheng and Church Algorithm performs encrypted computations such as sum, or matrix multiplication in Python for biclustering algorithm

SeQual

Parallel tool that allows to perform various quality controls, as well as transformations, on genomic sequence datasets in an efficient way.

shokofehvs.github.io

Professional website forked from mmistakes/minimal-mistakes

VariantSpark

machine learning for genomic variants

REMBic-BCCA