Joshua Chan's repositories
BiomassMW
Determining the chemical formulae and molecular weights of macromolecules in genome-scale metabolic models
Language:MATLAB000
Language:Python000
COBRA.tutorials
Repository of tutorials for The COBRA Toolbox
Language:MATLAB000
cobrapy
COBRApy is a package for constraint-based modeling of biological networks
Language:PythonGPL-2.0000
cobratoolbox
COnstraints Based Reconstruction and Analysis toolbox for MATLAB
Language:MATLABNOASSERTION000
DecompFlux
For finding the decomposition of a flux distribution into elementary modes in a genome-scale metabolic network, without the need of the EFM matrix a priori.
Language:MATLABGPL-3.0000
Language:PythonMIT000
Language:MATLAB000
MinBranchDecomp
Minimal branching decomposition
Language:MatlabGPL-3.0000
NOASSERTION000
spatialGut
spatialGut: simulating the longitudinally and radially varying gut microbiota composition
000
SteadyCom
Computing the maximum growth rate of a microbial community at community steady-state
Language:MATLAB000