Shangzhe Zhang (shangshanzhizhe)

shangshanzhizhe

Geek Repo

Location:St Andrews, Fife, Scotland

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Organizations
UosaBaileyLab

Shangzhe Zhang's starred repositories

genomeGTFtools

convert various features into a GFF-like file for use in genome browsers

Language:PythonStargazers:67Issues:0Issues:0

SURVIVOR

Toolset for SV simulation, comparison and filtering

Language:C++License:MITStargazers:337Issues:0Issues:0

lumpy-sv

lumpy: a general probabilistic framework for structural variant discovery

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BIOL130173

复旦大学生命科学学院《生命科学中的机器学习》

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GAworkshop

Genome Analysis Workshop (Jena 2016) material

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Sniffles

Structural variation caller using third generation sequencing

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ngmlr

NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations

Language:C++License:MITStargazers:285Issues:0Issues:0

mastering-shiny

Mastering Shiny: a book

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samtools

Tools (written in C using htslib) for manipulating next-generation sequencing data

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BuffaloAssemblyScripts

BuffaloAssemblyScripts

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fastp

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

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996.ICU

Repo for counting stars and contributing. Press F to pay respect to glorious developers.

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996.Leave

逃离996

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libpku

贵校课程资料民间整理

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svtyper

Bayesian genotyper for structural variants

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MashMap

A fast approximate aligner for long DNA sequences

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jcvi

Python library to facilitate genome assembly, annotation, and comparative genomics

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LDJump

R Package to Estimate Variable Recombination Rates using Population Genetic Data

Language:RLicense:MITStargazers:37Issues:0Issues:0

free-programming-books-zh_CN

:books: 免费的计算机编程类中文书籍,欢迎投稿

License:GPL-3.0Stargazers:110646Issues:0Issues:0

wtfpython-cn

wtfpython的中文翻译/施工结束/ 能力有限,欢迎帮我改进翻译

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bio_tools

Useful bioinformatic scripts

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Awesome-Bioinformatics

A curated list of awesome Bioinformatics libraries and software.

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PopLDdecay

PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files

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sec-chart

安全思维导图集合

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Awesome-Hacking

A collection of various awesome lists for hackers, pentesters and security researchers

License:CC0-1.0Stargazers:80898Issues:0Issues:0

awesome-web-hacking

A list of web application security

License:MITStargazers:5636Issues:0Issues:0