shajoezhu / RNA-Seq_course

RNA-Seq_course

Concepts and Main Aspects of RNA-Seq

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• 25th, 28th and 29th April 2016
• Wellcome Trust Centre for Human Genetics, Seminar Rooms A/B

Main organizers

• Irina Pulyakhina
• Helen Lockstone

Teachers

• Paolo Piazza
• Helen Lockstone
• Irina Pulyakhina
• Davis McCarthy
• ...

Lectures

You can find lectures given during the course here:

• Introduction to NGS
• Experimental design
• Introduction to RNA-Seq
• Alignment
• Transcript quantification
• DE analysis and edgeR
• Pathway analysis
• Visualisation
• Splicing
• Cutting edge technologies
• Single cell sequencing

Data

Where to find the VMs:

• fow Windows users
• for MacOS users

Instructions on how to install the VM can be found here.

UCSC session for the second practical on visualisation can be found here.

for GMS students

To get sequencing data that you generated during the NGS course in March, please contact Irina Pulyakhina (room 00-038, [e-mail]).

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Designed by Irina Pulyakhina, [e-mail]