Error while building the docker image
arthursw opened this issue · comments
I have an error when building the docker image:
Step 22/31 : ADD .keras $HOME/.keras ADD failed: stat /var/lib/docker/tmp/docker-builder587429593/.keras: no such file or directory
It seems there was an error while building / installing Keras, due to a conflict between libraries:
ERROR: tensorflow-gpu 1.6.0 has requirement tensorboard<1.7.0,>=1.6.0, but you'll have tensorboard 2.1.0 which is incompatible.
ERROR: tensorflow 2.1.0 has requirement numpy<2.0,>=1.16.0, but you'll have numpy 1.13.3 which is incompatible.
ERROR: tensorflow 2.1.0 has requirement scipy==1.2.2; python_version < "3", but you'll have scipy 1.0.0 which is incompatible.
ERROR: tensorflow 2.1.0 has requirement six>=1.12.0, but you'll have six 1.10.0 which is incompatible.
Maybe due to the fact that python2.7 is deprecated:
DEPRECATION: Python 2.7 reached the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 is no longer maintained. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support
Anyway, I'll try the pre-compiled docker version.
Here is the entire output:
(base) arthursw@machine:~/nicMSlesions$ docker build -f Dockerfile -t nicmslesions .
Sending build context to Docker daemon 670.8MB
Step 1/31 : FROM nvidia/cuda:8.0-cudnn5-devel-ubuntu16.04
8.0-cudnn5-devel-ubuntu16.04: Pulling from nvidia/cuda
976a760c94fc: Pull complete
c58992f3c37b: Pull complete
0ca0e5e7f12e: Pull complete
f2a274cc00ca: Pull complete
18f6bda03f84: Pull complete
440e5e4bf99b: Pull complete
9efec85da402: Pull complete
c4d36a838ac7: Pull complete
2c30398ef7e3: Pull complete
8fd70f952b09: Pull complete
Digest: sha256:e4cc3480031acb72e3ba3ce5b4dd14d1f7be2133ad206766a5f353a7de3ae857
Status: Downloaded newer image for nvidia/cuda:8.0-cudnn5-devel-ubuntu16.04
---> db7f23a9ae16
Step 2/31 : MAINTAINER Sergi Valverde <svalverde@eia.udg.edu>
---> Running in 9e669ff87aa3
Removing intermediate container 9e669ff87aa3
---> 489a80e906b0
Step 3/31 : RUN apt-get update && apt-get install -y gfortran git wget liblapack-dev libopenblas-dev python-dev python-tk git curl emacs24
---> Running in f918d957f201
Get:1 http://security.ubuntu.com/ubuntu xenial-security InRelease [109 kB]
Get:2 http://archive.ubuntu.com/ubuntu xenial InRelease [247 kB]
Get:3 http://archive.ubuntu.com/ubuntu xenial-updates InRelease [109 kB]
Get:4 http://archive.ubuntu.com/ubuntu xenial-backports InRelease [107 kB]
Get:5 http://security.ubuntu.com/ubuntu xenial-security/main amd64 Packages [1049 kB]
Ign:6 https://developer.download.nvidia.com/compute/cuda/repos/ubuntu1604/x86_64 InRelease
Get:7 http://security.ubuntu.com/ubuntu xenial-security/restricted amd64 Packages [12.7 kB]
Get:8 http://security.ubuntu.com/ubuntu xenial-security/universe amd64 Packages [611 kB]
Get:9 http://archive.ubuntu.com/ubuntu xenial/main amd64 Packages [1558 kB]
Ign:10 https://developer.download.nvidia.com/compute/machine-learning/repos/ubuntu1604/x86_64 InRelease
Get:11 http://security.ubuntu.com/ubuntu xenial-security/multiverse amd64 Packages [6282 B]
Get:12 http://archive.ubuntu.com/ubuntu xenial/restricted amd64 Packages [14.1 kB]
Get:13 http://archive.ubuntu.com/ubuntu xenial/universe amd64 Packages [9827 kB]
Get:14 https://developer.download.nvidia.com/compute/cuda/repos/ubuntu1604/x86_64 Release [564 B]
Get:15 https://developer.download.nvidia.com/compute/machine-learning/repos/ubuntu1604/x86_64 Release [564 B]
Get:16 https://developer.download.nvidia.com/compute/cuda/repos/ubuntu1604/x86_64 Release.gpg [833 B]
Get:17 https://developer.download.nvidia.com/compute/machine-learning/repos/ubuntu1604/x86_64 Release.gpg [833 B]
Get:18 https://developer.download.nvidia.com/compute/cuda/repos/ubuntu1604/x86_64 Packages [248 kB]
Get:19 http://archive.ubuntu.com/ubuntu xenial/multiverse amd64 Packages [176 kB]
Get:20 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 Packages [1419 kB]
Get:21 https://developer.download.nvidia.com/compute/machine-learning/repos/ubuntu1604/x86_64 Packages [80.2 kB]
Get:22 http://archive.ubuntu.com/ubuntu xenial-updates/restricted amd64 Packages [13.1 kB]
Get:23 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 Packages [1013 kB]
Get:24 http://archive.ubuntu.com/ubuntu xenial-updates/multiverse amd64 Packages [19.3 kB]
Get:25 http://archive.ubuntu.com/ubuntu xenial-backports/main amd64 Packages [7942 B]
Get:26 http://archive.ubuntu.com/ubuntu xenial-backports/universe amd64 Packages [8807 B]
Fetched 16.6 MB in 2s (6858 kB/s)
Reading package lists...
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
acl adwaita-icon-theme at-spi2-core blt colord colord-data dbus
dconf-gsettings-backend dconf-service emacs24-bin-common emacs24-common
emacs24-common-non-dfsg emacs24-el emacsen-common file fontconfig
fontconfig-config fonts-dejavu-core gconf-service gconf-service-backend
gconf2-common gfortran-5 ghostscript git-man glib-networking
glib-networking-common glib-networking-services gsettings-desktop-schemas
gsfonts hicolor-icon-theme humanity-icon-theme imagemagick-common less
libasound2 libasound2-data libatk-bridge2.0-0 libatk1.0-0 libatk1.0-data
libatspi2.0-0 libavahi-client3 libavahi-common-data libavahi-common3
libblas-common libblas-dev libblas3 libboost-filesystem1.58.0
libboost-system1.58.0 libbsd0 libcairo-gobject2 libcairo2 libcap-ng0
libcapnp-0.5.3 libcolord2 libcolorhug2 libcroco3 libcups2 libcupsfilters1
libcupsimage2 libdatrie1 libdbus-1-3 libdbus-glib-1-2 libdconf1
libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-nouveau2 libdrm-radeon1
libdrm2 libedit2 libegl1-mesa libelf1 libepoxy0 liberror-perl libexif12
libexpat1 libexpat1-dev libfftw3-double3 libfontconfig1 libfreetype6
libfribidi0 libgbm1 libgconf-2-4 libgd3 libgdk-pixbuf2.0-0
libgdk-pixbuf2.0-common libgfortran-5-dev libgfortran3 libgif7
libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglib2.0-data libgphoto2-6
libgphoto2-l10n libgphoto2-port12 libgpm2 libgraphite2-3 libgs9
libgs9-common libgtk-3-0 libgtk-3-bin libgtk-3-common libgudev-1.0-0
libgusb2 libharfbuzz0b libice6 libicu55 libieee1284-3 libijs-0.35 libjbig0
libjbig2dec0 libjpeg-turbo8 libjpeg8 libjson-glib-1.0-0
libjson-glib-1.0-common liblapack3 liblcms2-2 libllvm6.0 liblockfile-bin
liblockfile1 liblqr-1-0 libltdl7 libm17n-0 libmagic1 libmagickcore-6.q16-2
libmagickwand-6.q16-2 libmirclient9 libmircommon7 libmircore1
libmirprotobuf3 libopenblas-base libotf0 libpam-systemd libpango-1.0-0
libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpciaccess0
libpixman-1-0 libpng12-0 libpolkit-agent-1-0 libpolkit-backend-1-0
libpolkit-gobject-1-0 libpopt0 libprotobuf-lite9v5 libproxy1v5 libpython-dev
libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal
libpython2.7-stdlib librest-0.7-0 librsvg2-2 librsvg2-common libsane
libsane-common libsensors4 libsm6 libsoup-gnome2.4-1 libsoup2.4-1
libsystemd0 libtcl8.6 libthai-data libthai0 libtiff5 libtk8.6
libtxc-dxtn-s2tc0 libusb-1.0-0 libvpx3 libwayland-client0 libwayland-cursor0
libwayland-egl1-mesa libwayland-server0 libx11-6 libx11-data libx11-xcb1
libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-present0 libxcb-render0
libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1
libxdamage1 libxdmcp6 libxext6 libxfixes3 libxft2 libxi6 libxinerama1
libxkbcommon0 libxml2 libxmuu1 libxpm4 libxrandr2 libxrender1 libxshmfence1
libxss1 libxt6 libxtst6 m17n-db mime-support openssh-client policykit-1
poppler-data python python-minimal python2.7 python2.7-dev python2.7-minimal
rsync sgml-base shared-mime-info systemd tk8.6-blt2.5 tzdata ubuntu-mono ucf
x11-common xauth xdg-user-dirs xkb-data xml-core
Suggested packages:
blt-demo colord-sensor-argyll dbus-user-session | dbus-x11 ncurses-term
gfortran-multilib gfortran-doc gfortran-5-multilib gfortran-5-doc
libgfortran3-dbg ghostscript-x hpijs gettext-base git-daemon-run
| git-daemon-sysvinit git-doc git-el git-email git-gui gitk gitweb git-arch
git-cvs git-mediawiki git-svn libasound2-plugins alsa-utils
liblapack-doc-man liblapack-doc cups-common libfftw3-bin libfftw3-dev
libgd-tools gphoto2 gpm fonts-droid texlive-lang-cjk gvfs liblcms2-utils
m17n-docs libmagickcore-6.q16-2-extra pciutils librsvg2-bin avahi-daemon
hplip libsane-extras sane-utils lm-sensors tcl8.6 tk8.6 gawk ssh-askpass
libpam-ssh keychain monkeysphere poppler-utils fonts-japanese-mincho
| fonts-ipafont-mincho fonts-japanese-gothic | fonts-ipafont-gothic
fonts-arphic-ukai fonts-arphic-uming fonts-nanum python-doc tix
python-tk-dbg python2.7-doc binfmt-support openssh-server sgml-base-doc
systemd-ui systemd-container debhelper
The following NEW packages will be installed:
acl adwaita-icon-theme at-spi2-core blt colord colord-data curl dbus
dconf-gsettings-backend dconf-service emacs24 emacs24-bin-common
emacs24-common emacs24-common-non-dfsg emacs24-el emacsen-common file
fontconfig fontconfig-config fonts-dejavu-core gconf-service
gconf-service-backend gconf2-common gfortran gfortran-5 ghostscript git
git-man glib-networking glib-networking-common glib-networking-services
gsettings-desktop-schemas gsfonts hicolor-icon-theme humanity-icon-theme
imagemagick-common less libasound2 libasound2-data libatk-bridge2.0-0
libatk1.0-0 libatk1.0-data libatspi2.0-0 libavahi-client3
libavahi-common-data libavahi-common3 libblas-common libblas-dev libblas3
libboost-filesystem1.58.0 libboost-system1.58.0 libbsd0 libcairo-gobject2
libcairo2 libcap-ng0 libcapnp-0.5.3 libcolord2 libcolorhug2 libcroco3
libcups2 libcupsfilters1 libcupsimage2 libdatrie1 libdbus-1-3
libdbus-glib-1-2 libdconf1 libdrm-amdgpu1 libdrm-common libdrm-intel1
libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libegl1-mesa libelf1
libepoxy0 liberror-perl libexif12 libexpat1 libexpat1-dev libfftw3-double3
libfontconfig1 libfreetype6 libfribidi0 libgbm1 libgconf-2-4 libgd3
libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran-5-dev libgfortran3
libgif7 libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglib2.0-data
libgphoto2-6 libgphoto2-l10n libgphoto2-port12 libgpm2 libgraphite2-3 libgs9
libgs9-common libgtk-3-0 libgtk-3-bin libgtk-3-common libgudev-1.0-0
libgusb2 libharfbuzz0b libice6 libicu55 libieee1284-3 libijs-0.35 libjbig0
libjbig2dec0 libjpeg-turbo8 libjpeg8 libjson-glib-1.0-0
libjson-glib-1.0-common liblapack-dev liblapack3 liblcms2-2 libllvm6.0
liblockfile-bin liblockfile1 liblqr-1-0 libltdl7 libm17n-0 libmagic1
libmagickcore-6.q16-2 libmagickwand-6.q16-2 libmirclient9 libmircommon7
libmircore1 libmirprotobuf3 libopenblas-base libopenblas-dev libotf0
libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
libpaper-utils libpaper1 libpciaccess0 libpixman-1-0 libpng12-0
libpolkit-agent-1-0 libpolkit-backend-1-0 libpolkit-gobject-1-0 libpopt0
libprotobuf-lite9v5 libproxy1v5 libpython-dev libpython-stdlib libpython2.7
libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib librest-0.7-0
librsvg2-2 librsvg2-common libsane libsane-common libsensors4 libsm6
libsoup-gnome2.4-1 libsoup2.4-1 libtcl8.6 libthai-data libthai0 libtiff5
libtk8.6 libtxc-dxtn-s2tc0 libusb-1.0-0 libvpx3 libwayland-client0
libwayland-cursor0 libwayland-egl1-mesa libwayland-server0 libx11-6
libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-present0
libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1
libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxft2
libxi6 libxinerama1 libxkbcommon0 libxml2 libxmuu1 libxpm4 libxrandr2
libxrender1 libxshmfence1 libxss1 libxt6 libxtst6 m17n-db mime-support
openssh-client policykit-1 poppler-data python python-dev python-minimal
python-tk python2.7 python2.7-dev python2.7-minimal rsync sgml-base
shared-mime-info tk8.6-blt2.5 tzdata ubuntu-mono ucf wget x11-common xauth
xdg-user-dirs xkb-data xml-core
The following packages will be upgraded:
libsystemd0 systemd
2 upgraded, 236 newly installed, 0 to remove and 21 not upgraded.
Need to get 172 MB of archives.
After this operation, 764 MB of additional disk space will be used.
Get:1 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libsystemd0 amd64 229-4ubuntu21.27 [205 kB]
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Get:4 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libglib2.0-0 amd64 2.48.2-0ubuntu4.4 [1120 kB]
Get:5 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxau6 amd64 1:1.0.8-1 [8376 B]
Get:6 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxdmcp6 amd64 1:1.1.2-1.1 [11.0 kB]
Get:7 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxcb1 amd64 1.11.1-1ubuntu1 [40.0 kB]
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Get:9 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libx11-6 amd64 2:1.6.3-1ubuntu2.1 [570 kB]
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Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 sgml-base all 1.26+nmu4ubuntu1 [12.5 kB]
Get:12 http://archive.ubuntu.com/ubuntu xenial/main amd64 fonts-dejavu-core all 2.35-1 [1039 kB]
Get:13 http://archive.ubuntu.com/ubuntu xenial/main amd64 ucf all 3.0036 [52.9 kB]
Get:14 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 fontconfig-config all 2.11.94-0ubuntu1.1 [49.9 kB]
Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libexpat1 amd64 2.1.0-7ubuntu0.16.04.5 [71.5 kB]
Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpng12-0 amd64 1.2.54-1ubuntu1.1 [116 kB]
Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libfreetype6 amd64 2.6.1-0.1ubuntu2.4 [315 kB]
Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libfontconfig1 amd64 2.11.94-0ubuntu1.1 [131 kB]
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Get:20 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 imagemagick-common all 8:6.8.9.9-7ubuntu5.15 [42.2 kB]
Get:21 http://archive.ubuntu.com/ubuntu xenial/main amd64 libexif12 amd64 0.6.21-2 [77.6 kB]
Get:22 http://archive.ubuntu.com/ubuntu xenial/main amd64 libfftw3-double3 amd64 3.3.4-2ubuntu1 [718 kB]
Get:23 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgpm2 amd64 1.20.4-6.1 [16.5 kB]
Get:24 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 x11-common all 1:7.7+13ubuntu3.1 [22.9 kB]
Get:25 http://archive.ubuntu.com/ubuntu xenial/main amd64 libice6 amd64 2:1.0.9-1 [39.2 kB]
Get:26 http://archive.ubuntu.com/ubuntu xenial/main amd64 libieee1284-3 amd64 0.2.11-12 [23.8 kB]
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Get:28 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblockfile-bin amd64 1.09-6ubuntu1 [10.8 kB]
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Get:30 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblqr-1-0 amd64 0.4.2-2 [23.6 kB]
Get:31 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjbig0 amd64 2.1-3.1 [26.6 kB]
Get:32 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjpeg8 amd64 8c-2ubuntu8 [2194 B]
Get:33 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 liblcms2-2 amd64 2.6-3ubuntu2.1 [136 kB]
Get:34 http://archive.ubuntu.com/ubuntu xenial/main amd64 libltdl7 amd64 2.4.6-0.1 [38.3 kB]
Get:35 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtiff5 amd64 4.0.6-1ubuntu0.7 [149 kB]
Get:36 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libicu55 amd64 55.1-7ubuntu0.4 [7646 kB]
Get:37 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libxml2 amd64 2.9.3+dfsg1-1ubuntu0.6 [697 kB]
Get:38 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmagickcore-6.q16-2 amd64 8:6.8.9.9-7ubuntu5.15 [1581 kB]
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Get:40 http://archive.ubuntu.com/ubuntu xenial/main amd64 libproxy1v5 amd64 0.4.11-5ubuntu1 [48.6 kB]
Get:41 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 glib-networking-common all 2.48.2-1~ubuntu16.04.1 [10.9 kB]
Get:42 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 glib-networking-services amd64 2.48.2-1~ubuntu16.04.1 [16.0 kB]
Get:43 http://archive.ubuntu.com/ubuntu xenial/main amd64 libdconf1 amd64 0.24.0-2 [31.4 kB]
Get:44 http://archive.ubuntu.com/ubuntu xenial/main amd64 dconf-service amd64 0.24.0-2 [27.1 kB]
Get:45 http://archive.ubuntu.com/ubuntu xenial/main amd64 dconf-gsettings-backend amd64 0.24.0-2 [19.4 kB]
Get:46 http://archive.ubuntu.com/ubuntu xenial/main amd64 gsettings-desktop-schemas all 3.18.1-1ubuntu1 [25.9 kB]
Get:47 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 glib-networking amd64 2.48.2-1~ubuntu16.04.1 [43.7 kB]
Get:48 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libsoup2.4-1 amd64 2.52.2-1ubuntu0.3 [270 kB]
Get:49 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libsoup-gnome2.4-1 amd64 2.52.2-1ubuntu0.3 [4986 B]
Get:50 http://archive.ubuntu.com/ubuntu xenial/main amd64 librest-0.7-0 amd64 0.7.93-1 [31.9 kB]
Get:51 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libsane-common all 1.0.25+git20150528-1ubuntu2.16.04.1 [710 kB]
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Get:57 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxft2 amd64 2.3.2-1 [36.1 kB]
Get:58 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxinerama1 amd64 2:1.1.3-1 [7908 B]
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Get:66 http://archive.ubuntu.com/ubuntu xenial/main amd64 mime-support all 3.59ubuntu1 [31.0 kB]
Get:67 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython2.7-stdlib amd64 2.7.12-1ubuntu0~16.04.9 [1884 kB]
Get:68 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python2.7 amd64 2.7.12-1ubuntu0~16.04.9 [224 kB]
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Get:70 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python amd64 2.7.12-1~16.04 [137 kB]
Get:71 http://archive.ubuntu.com/ubuntu xenial/main amd64 libtxc-dxtn-s2tc0 amd64 0~git20131104-1.1 [51.8 kB]
Get:72 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 tzdata all 2019c-0ubuntu0.16.04 [168 kB]
Get:73 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmagic1 amd64 1:5.25-2ubuntu1.3 [216 kB]
Get:74 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 file amd64 1:5.25-2ubuntu1.3 [21.3 kB]
Get:75 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 less amd64 481-2.1ubuntu0.2 [110 kB]
Get:76 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libbsd0 amd64 0.8.2-1ubuntu0.1 [42.0 kB]
Get:77 http://archive.ubuntu.com/ubuntu xenial/main amd64 libfribidi0 amd64 0.19.7-1 [25.1 kB]
Get:78 http://archive.ubuntu.com/ubuntu xenial/main amd64 xkb-data all 2.16-1ubuntu1 [305 kB]
Get:79 http://archive.ubuntu.com/ubuntu xenial/main amd64 libcap-ng0 amd64 0.7.7-1 [10.9 kB]
Get:80 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libdbus-1-3 amd64 1.10.6-1ubuntu3.5 [161 kB]
Get:81 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 dbus amd64 1.10.6-1ubuntu3.5 [141 kB]
Get:82 http://archive.ubuntu.com/ubuntu xenial/main amd64 libdbus-glib-1-2 amd64 0.106-1 [67.1 kB]
Get:83 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libdrm-common all 2.4.91-2~16.04.1 [4764 B]
Get:84 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libdrm2 amd64 2.4.91-2~16.04.1 [30.8 kB]
Get:85 http://archive.ubuntu.com/ubuntu xenial/main amd64 libedit2 amd64 3.1-20150325-1ubuntu2 [76.5 kB]
Get:86 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libelf1 amd64 0.165-3ubuntu1.2 [43.5 kB]
Get:87 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libglib2.0-data all 2.48.2-0ubuntu4.4 [131 kB]
Get:88 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpam-systemd amd64 229-4ubuntu21.27 [115 kB]
Get:89 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpolkit-gobject-1-0 amd64 0.105-14.1ubuntu0.5 [36.6 kB]
Get:90 http://archive.ubuntu.com/ubuntu xenial/main amd64 libusb-1.0-0 amd64 2:1.0.20-1 [42.9 kB]
Get:91 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxmuu1 amd64 2:1.1.2-2 [9674 B]
Get:92 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 openssh-client amd64 1:7.2p2-4ubuntu2.8 [590 kB]
Get:93 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 rsync amd64 3.1.1-3ubuntu1.2 [329 kB]
Get:94 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 shared-mime-info amd64 1.5-2ubuntu0.2 [405 kB]
Get:95 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 wget amd64 1.17.1-1ubuntu1.5 [299 kB]
Get:96 http://archive.ubuntu.com/ubuntu xenial/main amd64 xauth amd64 1:1.0.9-1ubuntu2 [22.7 kB]
Get:97 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 xdg-user-dirs amd64 0.15-2ubuntu6.16.04.1 [61.8 kB]
Get:98 http://archive.ubuntu.com/ubuntu xenial/main amd64 xml-core all 0.13+nmu2 [23.3 kB]
Get:99 http://archive.ubuntu.com/ubuntu xenial/main amd64 acl amd64 2.2.52-3 [38.0 kB]
Get:100 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 hicolor-icon-theme all 0.15-0ubuntu1.1 [7698 B]
Get:101 http://archive.ubuntu.com/ubuntu xenial/main amd64 libpixman-1-0 amd64 0.33.6-1 [231 kB]
Get:102 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxcb-render0 amd64 1.11.1-1ubuntu1 [11.4 kB]
Get:103 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxcb-shm0 amd64 1.11.1-1ubuntu1 [5588 B]
Get:104 http://archive.ubuntu.com/ubuntu xenial/main amd64 libcairo2 amd64 1.14.6-1 [555 kB]
Get:105 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgtk-3-common all 3.18.9-1ubuntu3.3 [206 kB]
Get:106 http://archive.ubuntu.com/ubuntu xenial/main amd64 libatk1.0-data all 2.18.0-1 [17.1 kB]
Get:107 http://archive.ubuntu.com/ubuntu xenial/main amd64 libatk1.0-0 amd64 2.18.0-1 [56.9 kB]
Get:108 http://archive.ubuntu.com/ubuntu xenial/main amd64 libatspi2.0-0 amd64 2.18.3-4ubuntu1 [57.4 kB]
Get:109 http://archive.ubuntu.com/ubuntu xenial/main amd64 libatk-bridge2.0-0 amd64 2.18.1-2ubuntu1 [52.8 kB]
Get:110 http://archive.ubuntu.com/ubuntu xenial/main amd64 libcairo-gobject2 amd64 1.14.6-1 [17.3 kB]
Get:111 http://archive.ubuntu.com/ubuntu xenial/main amd64 libcolord2 amd64 1.2.12-1ubuntu1 [104 kB]
Get:112 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libavahi-common-data amd64 0.6.32~rc+dfsg-1ubuntu2.3 [21.5 kB]
Get:113 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libavahi-common3 amd64 0.6.32~rc+dfsg-1ubuntu2.3 [21.7 kB]
Get:114 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libavahi-client3 amd64 0.6.32~rc+dfsg-1ubuntu2.3 [25.3 kB]
Get:115 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcups2 amd64 2.1.3-4ubuntu0.10 [197 kB]
Get:116 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libepoxy0 amd64 1.3.1-1ubuntu0.16.04.2 [177 kB]
Get:117 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgdk-pixbuf2.0-common all 2.32.2-1ubuntu1.6 [10.3 kB]
Get:118 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgdk-pixbuf2.0-0 amd64 2.32.2-1ubuntu1.6 [159 kB]
Get:119 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjson-glib-1.0-common all 1.1.2-0ubuntu1 [6172 B]
Get:120 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjson-glib-1.0-0 amd64 1.1.2-0ubuntu1 [60.3 kB]
Get:121 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libboost-system1.58.0 amd64 1.58.0+dfsg-5ubuntu3.1 [9146 B]
Get:122 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcapnp-0.5.3 amd64 0.5.3-2ubuntu1.1 [580 kB]
Get:123 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libboost-filesystem1.58.0 amd64 1.58.0+dfsg-5ubuntu3.1 [37.5 kB]
Get:124 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmircore1 amd64 0.26.3+16.04.20170605-0ubuntu1.1 [24.4 kB]
Get:125 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmircommon7 amd64 0.26.3+16.04.20170605-0ubuntu1.1 [89.7 kB]
Get:126 http://archive.ubuntu.com/ubuntu xenial/main amd64 libprotobuf-lite9v5 amd64 2.6.1-1.3 [58.4 kB]
Get:127 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmirprotobuf3 amd64 0.26.3+16.04.20170605-0ubuntu1.1 [120 kB]
Get:128 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libxkbcommon0 amd64 0.5.0-1ubuntu2.1 [96.7 kB]
Get:129 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmirclient9 amd64 0.26.3+16.04.20170605-0ubuntu1.1 [194 kB]
Get:130 http://archive.ubuntu.com/ubuntu xenial/main amd64 libthai-data all 0.1.24-2 [131 kB]
Get:131 http://archive.ubuntu.com/ubuntu xenial/main amd64 libdatrie1 amd64 0.2.10-2 [17.3 kB]
Get:132 http://archive.ubuntu.com/ubuntu xenial/main amd64 libthai0 amd64 0.1.24-2 [17.3 kB]
Get:133 http://archive.ubuntu.com/ubuntu xenial/main amd64 libpango-1.0-0 amd64 1.38.1-1 [148 kB]
Get:134 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgraphite2-3 amd64 1.3.10-0ubuntu0.16.04.1 [71.7 kB]
Get:135 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libharfbuzz0b amd64 1.0.1-1ubuntu0.1 [140 kB]
Get:136 http://archive.ubuntu.com/ubuntu xenial/main amd64 libpangoft2-1.0-0 amd64 1.38.1-1 [33.3 kB]
Get:137 http://archive.ubuntu.com/ubuntu xenial/main amd64 libpangocairo-1.0-0 amd64 1.38.1-1 [20.5 kB]
Get:138 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libwayland-client0 amd64 1.12.0-1~ubuntu16.04.3 [22.5 kB]
Get:139 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libwayland-cursor0 amd64 1.12.0-1~ubuntu16.04.3 [10.1 kB]
Get:140 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libwayland-server0 amd64 1.12.0-1~ubuntu16.04.3 [28.0 kB]
Get:141 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgbm1 amd64 18.0.5-0ubuntu0~16.04.1 [24.0 kB]
Get:142 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libglapi-mesa amd64 18.0.5-0ubuntu0~16.04.1 [23.4 kB]
Get:143 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libx11-xcb1 amd64 2:1.6.3-1ubuntu2.1 [9044 B]
Get:144 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxcb-dri2-0 amd64 1.11.1-1ubuntu1 [6882 B]
Get:145 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxcb-dri3-0 amd64 1.11.1-1ubuntu1 [5218 B]
Get:146 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxcb-present0 amd64 1.11.1-1ubuntu1 [5218 B]
Get:147 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxcb-sync1 amd64 1.11.1-1ubuntu1 [8324 B]
Get:148 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxcb-xfixes0 amd64 1.11.1-1ubuntu1 [8840 B]
Get:149 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libdrm-amdgpu1 amd64 2.4.91-2~16.04.1 [18.9 kB]
Get:150 http://archive.ubuntu.com/ubuntu xenial/main amd64 libpciaccess0 amd64 0.13.4-1 [18.1 kB]
Get:151 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libdrm-intel1 amd64 2.4.91-2~16.04.1 [59.9 kB]
Get:152 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libdrm-nouveau2 amd64 2.4.91-2~16.04.1 [16.3 kB]
Get:153 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libdrm-radeon1 amd64 2.4.91-2~16.04.1 [21.5 kB]
Get:154 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libllvm6.0 amd64 1:6.0-1ubuntu2~16.04.1 [14.3 MB]
Get:155 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsensors4 amd64 1:3.4.0-2 [28.4 kB]
Get:156 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgl1-mesa-dri amd64 18.0.5-0ubuntu0~16.04.1 [6080 kB]
Get:157 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libegl1-mesa amd64 18.0.5-0ubuntu0~16.04.1 [87.0 kB]
Get:158 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libwayland-egl1-mesa amd64 18.0.5-0ubuntu0~16.04.1 [5778 B]
Get:159 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libxcursor1 amd64 1:1.1.14-1ubuntu0.16.04.2 [19.9 kB]
Get:160 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxi6 amd64 2:1.7.6-1 [28.6 kB]
Get:161 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxrandr2 amd64 2:1.5.0-1 [17.6 kB]
Get:162 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgtk-3-0 amd64 3.18.9-1ubuntu3.3 [2352 kB]
Get:163 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgtk-3-bin amd64 3.18.9-1ubuntu3.3 [53.7 kB]
Get:164 http://archive.ubuntu.com/ubuntu xenial/main amd64 libcroco3 amd64 0.6.11-1 [81.6 kB]
Get:165 http://archive.ubuntu.com/ubuntu xenial/main amd64 librsvg2-2 amd64 2.40.13-3 [93.9 kB]
Get:166 http://archive.ubuntu.com/ubuntu xenial/main amd64 librsvg2-common amd64 2.40.13-3 [5034 B]
Get:167 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 humanity-icon-theme all 0.6.10.1 [1289 kB]
Get:168 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 ubuntu-mono all 14.04+16.04.20180326-0ubuntu1 [178 kB]
Get:169 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 adwaita-icon-theme all 3.18.0-2ubuntu3.1 [3359 kB]
Get:170 http://archive.ubuntu.com/ubuntu xenial/main amd64 at-spi2-core amd64 2.18.3-4ubuntu1 [45.7 kB]
Get:171 http://archive.ubuntu.com/ubuntu xenial/main amd64 libtcl8.6 amd64 8.6.5+dfsg-2 [875 kB]
Get:172 http://archive.ubuntu.com/ubuntu xenial/main amd64 libtk8.6 amd64 8.6.5-1 [693 kB]
Get:173 http://archive.ubuntu.com/ubuntu xenial/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-3 [574 kB]
Get:174 http://archive.ubuntu.com/ubuntu xenial/main amd64 blt amd64 2.5.3+dfsg-3 [4852 B]
Get:175 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgusb2 amd64 0.2.9-0ubuntu1 [20.2 kB]
Get:176 http://archive.ubuntu.com/ubuntu xenial/main amd64 libcolorhug2 amd64 1.2.12-1ubuntu1 [32.0 kB]
Get:177 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgudev-1.0-0 amd64 1:230-2 [13.0 kB]
Get:178 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libvpx3 amd64 1.5.0-2ubuntu1.1 [732 kB]
Get:179 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libxpm4 amd64 1:3.5.11-1ubuntu0.16.04.1 [33.8 kB]
Get:180 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgd3 amd64 2.1.1-4ubuntu0.16.04.11 [126 kB]
Get:181 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgphoto2-port12 amd64 2.5.9-3 [48.0 kB]
Get:182 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgphoto2-6 amd64 2.5.9-3 [787 kB]
Get:183 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libsane amd64 1.0.25+git20150528-1ubuntu2.16.04.1 [2012 kB]
Get:184 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpolkit-agent-1-0 amd64 0.105-14.1ubuntu0.5 [14.8 kB]
Get:185 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpolkit-backend-1-0 amd64 0.105-14.1ubuntu0.5 [36.2 kB]
Get:186 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 policykit-1 amd64 0.105-14.1ubuntu0.5 [52.8 kB]
Get:187 http://archive.ubuntu.com/ubuntu xenial/main amd64 colord-data all 1.2.12-1ubuntu1 [111 kB]
Get:188 http://archive.ubuntu.com/ubuntu xenial/main amd64 colord amd64 1.2.12-1ubuntu1 [178 kB]
Get:189 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 curl amd64 7.47.0-1ubuntu2.14 [139 kB]
Get:190 http://archive.ubuntu.com/ubuntu xenial/main amd64 emacsen-common all 2.0.8 [17.6 kB]
Get:191 http://archive.ubuntu.com/ubuntu xenial/main amd64 emacs24-common-non-dfsg all 24.4+1-2 [4545 kB]
Get:192 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 emacs24-common all 24.5+1-6ubuntu1.1 [12.7 MB]
Get:193 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 emacs24-bin-common amd64 24.5+1-6ubuntu1.1 [107 kB]
Get:194 http://archive.ubuntu.com/ubuntu xenial/main amd64 gconf2-common all 3.2.6-3ubuntu6 [21.0 kB]
Get:195 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgconf-2-4 amd64 3.2.6-3ubuntu6 [84.6 kB]
Get:196 http://archive.ubuntu.com/ubuntu xenial/main amd64 gconf-service-backend amd64 3.2.6-3ubuntu6 [57.5 kB]
Get:197 http://archive.ubuntu.com/ubuntu xenial/main amd64 gconf-service amd64 3.2.6-3ubuntu6 [2046 B]
Get:198 http://archive.ubuntu.com/ubuntu xenial/main amd64 libasound2-data all 1.1.0-0ubuntu1 [29.4 kB]
Get:199 http://archive.ubuntu.com/ubuntu xenial/main amd64 libasound2 amd64 1.1.0-0ubuntu1 [350 kB]
Get:200 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgif7 amd64 5.1.4-0.3~16.04.1 [30.5 kB]
Get:201 http://archive.ubuntu.com/ubuntu xenial/main amd64 libotf0 amd64 0.9.13-3 [44.6 kB]
Get:202 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxt6 amd64 1:1.1.5-0ubuntu1 [160 kB]
Get:203 http://archive.ubuntu.com/ubuntu xenial/main amd64 m17n-db all 1.7.0-2 [1239 kB]
Get:204 http://archive.ubuntu.com/ubuntu xenial/main amd64 libm17n-0 amd64 1.7.0-3 [242 kB]
Get:205 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 emacs24 amd64 24.5+1-6ubuntu1.1 [3352 kB]
Get:206 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 emacs24-el all 24.5+1-6ubuntu1.1 [15.3 MB]
Get:207 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgfortran3 amd64 5.4.0-6ubuntu1~16.04.12 [260 kB]
Get:208 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgfortran-5-dev amd64 5.4.0-6ubuntu1~16.04.12 [291 kB]
Get:209 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 gfortran-5 amd64 5.4.0-6ubuntu1~16.04.12 [8158 kB]
Get:210 http://archive.ubuntu.com/ubuntu xenial/main amd64 gfortran amd64 4:5.3.1-1ubuntu1 [1288 B]
Get:211 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcupsfilters1 amd64 1.8.3-2ubuntu3.5 [80.5 kB]
Get:212 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcupsimage2 amd64 2.1.3-4ubuntu0.10 [16.1 kB]
Get:213 http://archive.ubuntu.com/ubuntu xenial/main amd64 libijs-0.35 amd64 0.35-12 [15.5 kB]
Get:214 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libjbig2dec0 amd64 0.12+20150918-1ubuntu0.1 [55.3 kB]
Get:215 http://archive.ubuntu.com/ubuntu xenial/main amd64 libpaper1 amd64 1.1.24+nmu4ubuntu1 [13.7 kB]
Get:216 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgs9-common all 9.26~dfsg+0-0ubuntu0.16.04.12 [5095 kB]
Get:217 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgs9 amd64 9.26~dfsg+0-0ubuntu0.16.04.12 [2274 kB]
Get:218 http://archive.ubuntu.com/ubuntu xenial/main amd64 gsfonts all 1:8.11+urwcyr1.0.7~pre44-4.2ubuntu1 [3374 kB]
Get:219 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 ghostscript amd64 9.26~dfsg+0-0ubuntu0.16.04.12 [47.1 kB]
Get:220 http://archive.ubuntu.com/ubuntu xenial/main amd64 liberror-perl all 0.17-1.2 [19.6 kB]
Get:221 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 git-man all 1:2.7.4-0ubuntu1.7 [736 kB]
Get:222 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 git amd64 1:2.7.4-0ubuntu1.7 [3160 kB]
Get:223 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas-common amd64 3.6.0-2ubuntu2 [5342 B]
Get:224 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas3 amd64 3.6.0-2ubuntu2 [147 kB]
Get:225 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas-dev amd64 3.6.0-2ubuntu2 [153 kB]
Get:226 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libexpat1-dev amd64 2.1.0-7ubuntu0.16.04.5 [115 kB]
Get:227 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgphoto2-l10n all 2.5.9-3 [11.1 kB]
Get:228 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libopenblas-base amd64 0.2.18-1ubuntu1 [5097 kB]
Get:229 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblapack3 amd64 3.6.0-2ubuntu2 [1938 kB]
Get:230 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libopenblas-dev amd64 0.2.18-1ubuntu1 [3300 kB]
Get:231 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblapack-dev amd64 3.6.0-2ubuntu2 [1948 kB]
Get:232 http://archive.ubuntu.com/ubuntu xenial/main amd64 libpaper-utils amd64 1.1.24+nmu4ubuntu1 [8276 B]
Get:233 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython2.7 amd64 2.7.12-1ubuntu0~16.04.9 [1070 kB]
Get:234 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython2.7-dev amd64 2.7.12-1ubuntu0~16.04.9 [27.8 MB]
Get:235 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython-dev amd64 2.7.12-1~16.04 [7840 B]
Get:236 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python2.7-dev amd64 2.7.12-1ubuntu0~16.04.9 [276 kB]
Get:237 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python-dev amd64 2.7.12-1~16.04 [1186 B]
Get:238 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python-tk amd64 2.7.12-1~16.04 [26.3 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 172 MB in 16s (10.3 MB/s)
(Reading database ... 11644 files and directories currently installed.)
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Processing triggers for libc-bin (2.23-0ubuntu11) ...
Processing triggers for systemd (229-4ubuntu21.27) ...
Setting up libpopt0:amd64 (1.16-10) ...
Setting up libglib2.0-0:amd64 (2.48.2-0ubuntu4.4) ...
Setting up libxau6:amd64 (1:1.0.8-1) ...
Setting up libxdmcp6:amd64 (1:1.1.2-1.1) ...
Setting up libxcb1:amd64 (1.11.1-1ubuntu1) ...
Setting up libx11-data (2:1.6.3-1ubuntu2.1) ...
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Setting up libxext6:amd64 (2:1.3.3-1) ...
Setting up sgml-base (1.26+nmu4ubuntu1) ...
Setting up fonts-dejavu-core (2.35-1) ...
Setting up ucf (3.0036) ...
debconf: unable to initialize frontend: Dialog
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Setting up fontconfig-config (2.11.94-0ubuntu1.1) ...
Setting up libexpat1:amd64 (2.1.0-7ubuntu0.16.04.5) ...
Setting up libpng12-0:amd64 (1.2.54-1ubuntu1.1) ...
Setting up libfreetype6:amd64 (2.6.1-0.1ubuntu2.4) ...
Setting up libfontconfig1:amd64 (2.11.94-0ubuntu1.1) ...
Setting up fontconfig (2.11.94-0ubuntu1.1) ...
Regenerating fonts cache... done.
Setting up imagemagick-common (8:6.8.9.9-7ubuntu5.15) ...
Setting up libexif12:amd64 (0.6.21-2) ...
Setting up libfftw3-double3:amd64 (3.3.4-2ubuntu1) ...
Setting up libgpm2:amd64 (1.20.4-6.1) ...
Setting up x11-common (1:7.7+13ubuntu3.1) ...
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update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libice6:amd64 (2:1.0.9-1) ...
Setting up libieee1284-3:amd64 (0.2.11-12) ...
Setting up libjpeg-turbo8:amd64 (1.4.2-0ubuntu3.3) ...
Setting up liblockfile-bin (1.09-6ubuntu1) ...
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Setting up liblqr-1-0:amd64 (0.4.2-2) ...
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Setting up libjpeg8:amd64 (8c-2ubuntu8) ...
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Setting up libtiff5:amd64 (4.0.6-1ubuntu0.7) ...
Setting up libicu55:amd64 (55.1-7ubuntu0.4) ...
Setting up libxml2:amd64 (2.9.3+dfsg1-1ubuntu0.6) ...
Setting up libmagickcore-6.q16-2:amd64 (8:6.8.9.9-7ubuntu5.15) ...
Setting up libmagickwand-6.q16-2:amd64 (8:6.8.9.9-7ubuntu5.15) ...
Setting up libproxy1v5:amd64 (0.4.11-5ubuntu1) ...
Setting up glib-networking-common (2.48.2-1~ubuntu16.04.1) ...
Setting up glib-networking-services (2.48.2-1~ubuntu16.04.1) ...
Setting up libdconf1:amd64 (0.24.0-2) ...
Setting up dconf-service (0.24.0-2) ...
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Setting up gsettings-desktop-schemas (3.18.1-1ubuntu1) ...
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Setting up libsoup2.4-1:amd64 (2.52.2-1ubuntu0.3) ...
Setting up libsoup-gnome2.4-1:amd64 (2.52.2-1ubuntu0.3) ...
Setting up librest-0.7-0:amd64 (0.7.93-1) ...
Setting up libsane-common (1.0.25+git20150528-1ubuntu2.16.04.1) ...
Setting up libsm6:amd64 (2:1.2.2-1) ...
Setting up libxcomposite1:amd64 (1:0.4.4-1) ...
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Setting up libxrender1:amd64 (1:0.9.9-0ubuntu1) ...
Setting up libxft2:amd64 (2.3.2-1) ...
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Setting up libxshmfence1:amd64 (1.2-1) ...
Setting up libxss1:amd64 (1:1.2.2-1) ...
Setting up libxtst6:amd64 (2:1.2.2-1) ...
Setting up poppler-data (0.4.7-7) ...
Setting up mime-support (3.59ubuntu1) ...
Setting up libpython2.7-stdlib:amd64 (2.7.12-1ubuntu0~16.04.9) ...
Setting up python2.7 (2.7.12-1ubuntu0~16.04.9) ...
Setting up libpython-stdlib:amd64 (2.7.12-1~16.04) ...
Setting up python (2.7.12-1~16.04) ...
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update-alternatives: using /usr/lib/x86_64-linux-gnu/libtxc_dxtn_s2tc.so.0 to provide /usr/lib/x86_64-linux-gnu/libtxc_dxtn.so (libtxc-dxtn-x86_64-linux-gnu) in auto mode
Setting up tzdata (2019c-0ubuntu0.16.04) ...
debconf: unable to initialize frontend: Dialog
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Current default time zone: 'Etc/UTC'
Local time is now: Fri Feb 7 10:43:17 UTC 2020.
Universal Time is now: Fri Feb 7 10:43:17 UTC 2020.
Run 'dpkg-reconfigure tzdata' if you wish to change it.
Setting up libmagic1:amd64 (1:5.25-2ubuntu1.3) ...
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Setting up less (481-2.1ubuntu0.2) ...
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Setting up libbsd0:amd64 (0.8.2-1ubuntu0.1) ...
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Setting up dbus (1.10.6-1ubuntu3.5) ...
Setting up libdbus-glib-1-2:amd64 (0.106-1) ...
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Setting up libdrm2:amd64 (2.4.91-2~16.04.1) ...
Setting up libedit2:amd64 (3.1-20150325-1ubuntu2) ...
Setting up libelf1:amd64 (0.165-3ubuntu1.2) ...
Setting up libglib2.0-data (2.48.2-0ubuntu4.4) ...
Setting up libpam-systemd:amd64 (229-4ubuntu21.27) ...
debconf: unable to initialize frontend: Dialog
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Setting up libpolkit-gobject-1-0:amd64 (0.105-14.1ubuntu0.5) ...
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Setting up rsync (3.1.1-3ubuntu1.2) ...
invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of restart.
Setting up shared-mime-info (1.5-2ubuntu0.2) ...
Setting up wget (1.17.1-1ubuntu1.5) ...
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Setting up xdg-user-dirs (0.15-2ubuntu6.16.04.1) ...
Setting up xml-core (0.13+nmu2) ...
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Setting up hicolor-icon-theme (0.15-0ubuntu1.1) ...
Setting up libpixman-1-0:amd64 (0.33.6-1) ...
Setting up libxcb-render0:amd64 (1.11.1-1ubuntu1) ...
Setting up libxcb-shm0:amd64 (1.11.1-1ubuntu1) ...
Setting up libcairo2:amd64 (1.14.6-1) ...
Setting up libatk1.0-data (2.18.0-1) ...
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Setting up libatk-bridge2.0-0:amd64 (2.18.1-2ubuntu1) ...
Setting up libcairo-gobject2:amd64 (1.14.6-1) ...
Setting up libcolord2:amd64 (1.2.12-1ubuntu1) ...
Setting up libavahi-common-data:amd64 (0.6.32~rc+dfsg-1ubuntu2.3) ...
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Setting up libavahi-client3:amd64 (0.6.32~rc+dfsg-1ubuntu2.3) ...
Setting up libcups2:amd64 (2.1.3-4ubuntu0.10) ...
Setting up libepoxy0:amd64 (1.3.1-1ubuntu0.16.04.2) ...
Setting up libgdk-pixbuf2.0-common (2.32.2-1ubuntu1.6) ...
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Setting up libjson-glib-1.0-common (1.1.2-0ubuntu1) ...
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Setting up libboost-system1.58.0:amd64 (1.58.0+dfsg-5ubuntu3.1) ...
Setting up libcapnp-0.5.3:amd64 (0.5.3-2ubuntu1.1) ...
Setting up libboost-filesystem1.58.0:amd64 (1.58.0+dfsg-5ubuntu3.1) ...
Setting up libmircore1:amd64 (0.26.3+16.04.20170605-0ubuntu1.1) ...
Setting up libmircommon7:amd64 (0.26.3+16.04.20170605-0ubuntu1.1) ...
Setting up libprotobuf-lite9v5:amd64 (2.6.1-1.3) ...
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Setting up libxkbcommon0:amd64 (0.5.0-1ubuntu2.1) ...
Setting up libmirclient9:amd64 (0.26.3+16.04.20170605-0ubuntu1.1) ...
Setting up libthai-data (0.1.24-2) ...
Setting up libdatrie1:amd64 (0.2.10-2) ...
Setting up libthai0:amd64 (0.1.24-2) ...
Setting up libpango-1.0-0:amd64 (1.38.1-1) ...
Setting up libgraphite2-3:amd64 (1.3.10-0ubuntu0.16.04.1) ...
Setting up libharfbuzz0b:amd64 (1.0.1-1ubuntu0.1) ...
Setting up libpangoft2-1.0-0:amd64 (1.38.1-1) ...
Setting up libpangocairo-1.0-0:amd64 (1.38.1-1) ...
Setting up libwayland-client0:amd64 (1.12.0-1~ubuntu16.04.3) ...
Setting up libwayland-cursor0:amd64 (1.12.0-1~ubuntu16.04.3) ...
Setting up libwayland-server0:amd64 (1.12.0-1~ubuntu16.04.3) ...
Setting up libgbm1:amd64 (18.0.5-0ubuntu0~16.04.1) ...
Setting up libglapi-mesa:amd64 (18.0.5-0ubuntu0~16.04.1) ...
Setting up libx11-xcb1:amd64 (2:1.6.3-1ubuntu2.1) ...
Setting up libxcb-dri2-0:amd64 (1.11.1-1ubuntu1) ...
Setting up libxcb-dri3-0:amd64 (1.11.1-1ubuntu1) ...
Setting up libxcb-present0:amd64 (1.11.1-1ubuntu1) ...
Setting up libxcb-sync1:amd64 (1.11.1-1ubuntu1) ...
Setting up libxcb-xfixes0:amd64 (1.11.1-1ubuntu1) ...
Setting up libdrm-amdgpu1:amd64 (2.4.91-2~16.04.1) ...
Setting up libpciaccess0:amd64 (0.13.4-1) ...
Setting up libdrm-intel1:amd64 (2.4.91-2~16.04.1) ...
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Setting up libdrm-radeon1:amd64 (2.4.91-2~16.04.1) ...
Setting up libllvm6.0:amd64 (1:6.0-1ubuntu2~16.04.1) ...
Setting up libsensors4:amd64 (1:3.4.0-2) ...
Setting up libgl1-mesa-dri:amd64 (18.0.5-0ubuntu0~16.04.1) ...
Setting up libegl1-mesa:amd64 (18.0.5-0ubuntu0~16.04.1) ...
update-alternatives: using /usr/lib/x86_64-linux-gnu/mesa-egl/ld.so.conf to provide /etc/ld.so.conf.d/x86_64-linux-gnu_EGL.conf (x86_64-linux-gnu_egl_conf) in auto mode
Setting up libwayland-egl1-mesa:amd64 (18.0.5-0ubuntu0~16.04.1) ...
Setting up libxcursor1:amd64 (1:1.1.14-1ubuntu0.16.04.2) ...
Setting up libxi6:amd64 (2:1.7.6-1) ...
Setting up libxrandr2:amd64 (2:1.5.0-1) ...
Setting up libcroco3:amd64 (0.6.11-1) ...
Setting up librsvg2-2:amd64 (2.40.13-3) ...
Setting up librsvg2-common:amd64 (2.40.13-3) ...
Setting up at-spi2-core (2.18.3-4ubuntu1) ...
Setting up libtcl8.6:amd64 (8.6.5+dfsg-2) ...
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Setting up tk8.6-blt2.5 (2.5.3+dfsg-3) ...
Setting up blt (2.5.3+dfsg-3) ...
Setting up libgusb2:amd64 (0.2.9-0ubuntu1) ...
Setting up libcolorhug2:amd64 (1.2.12-1ubuntu1) ...
Setting up libgudev-1.0-0:amd64 (1:230-2) ...
Setting up libvpx3:amd64 (1.5.0-2ubuntu1.1) ...
Setting up libxpm4:amd64 (1:3.5.11-1ubuntu0.16.04.1) ...
Setting up libgd3:amd64 (2.1.1-4ubuntu0.16.04.11) ...
Setting up libgphoto2-port12:amd64 (2.5.9-3) ...
Setting up libgphoto2-6:amd64 (2.5.9-3) ...
Setting up libsane:amd64 (1.0.25+git20150528-1ubuntu2.16.04.1) ...
Adding scanner group...
Setting up libpolkit-agent-1-0:amd64 (0.105-14.1ubuntu0.5) ...
Setting up libpolkit-backend-1-0:amd64 (0.105-14.1ubuntu0.5) ...
Setting up policykit-1 (0.105-14.1ubuntu0.5) ...
Setting up colord-data (1.2.12-1ubuntu1) ...
Setting up colord (1.2.12-1ubuntu1) ...
Setting up curl (7.47.0-1ubuntu2.14) ...
Setting up emacsen-common (2.0.8) ...
Setting up emacs24-common-non-dfsg (24.4+1-2) ...
Setting up emacs24-common (24.5+1-6ubuntu1.1) ...
Setting up emacs24-bin-common (24.5+1-6ubuntu1.1) ...
update-alternatives: using /usr/bin/ctags.emacs24 to provide /usr/bin/ctags (ctags) in auto mode
update-alternatives: using /usr/bin/ebrowse.emacs24 to provide /usr/bin/ebrowse (ebrowse) in auto mode
update-alternatives: using /usr/bin/emacsclient.emacs24 to provide /usr/bin/emacsclient (emacsclient) in auto mode
update-alternatives: using /usr/bin/etags.emacs24 to provide /usr/bin/etags (etags) in auto mode
update-alternatives: using /usr/bin/grep-changelog.emacs24 to provide /usr/bin/grep-changelog (grep-changelog) in auto mode
Setting up gconf2-common (3.2.6-3ubuntu6) ...
debconf: unable to initialize frontend: Dialog
debconf: (TERM is not set, so the dialog frontend is not usable.)
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Creating config file /etc/gconf/2/path with new version
Setting up libgconf-2-4:amd64 (3.2.6-3ubuntu6) ...
Setting up libasound2-data (1.1.0-0ubuntu1) ...
Setting up libasound2:amd64 (1.1.0-0ubuntu1) ...
Setting up libgif7:amd64 (5.1.4-0.3~16.04.1) ...
Setting up libotf0:amd64 (0.9.13-3) ...
Setting up libxt6:amd64 (1:1.1.5-0ubuntu1) ...
Setting up m17n-db (1.7.0-2) ...
Setting up libm17n-0:amd64 (1.7.0-3) ...
Setting up emacs24-el (24.5+1-6ubuntu1.1) ...
Setting up libgfortran3:amd64 (5.4.0-6ubuntu1~16.04.12) ...
Setting up libgfortran-5-dev:amd64 (5.4.0-6ubuntu1~16.04.12) ...
Setting up gfortran-5 (5.4.0-6ubuntu1~16.04.12) ...
Setting up gfortran (4:5.3.1-1ubuntu1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up libcupsfilters1:amd64 (1.8.3-2ubuntu3.5) ...
Setting up libcupsimage2:amd64 (2.1.3-4ubuntu0.10) ...
Setting up libijs-0.35:amd64 (0.35-12) ...
Setting up libjbig2dec0 (0.12+20150918-1ubuntu0.1) ...
Setting up libpaper1:amd64 (1.1.24+nmu4ubuntu1) ...
debconf: unable to initialize frontend: Dialog
debconf: (TERM is not set, so the dialog frontend is not usable.)
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Creating config file /etc/papersize with new version
Setting up libgs9-common (9.26~dfsg+0-0ubuntu0.16.04.12) ...
update-alternatives: using /usr/share/ghostscript/9.26 to provide /usr/share/ghostscript/current (ghostscript-current) in auto mode
Setting up libgs9:amd64 (9.26~dfsg+0-0ubuntu0.16.04.12) ...
Setting up gsfonts (1:8.11+urwcyr1.0.7~pre44-4.2ubuntu1) ...
Setting up ghostscript (9.26~dfsg+0-0ubuntu0.16.04.12) ...
Setting up liberror-perl (0.17-1.2) ...
Setting up git-man (1:2.7.4-0ubuntu1.7) ...
Setting up git (1:2.7.4-0ubuntu1.7) ...
Setting up libblas-common (3.6.0-2ubuntu2) ...
Setting up libblas3 (3.6.0-2ubuntu2) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
Setting up libblas-dev (3.6.0-2ubuntu2) ...
update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode
Setting up libexpat1-dev:amd64 (2.1.0-7ubuntu0.16.04.5) ...
Setting up libgphoto2-l10n (2.5.9-3) ...
Setting up libopenblas-base (0.2.18-1ubuntu1) ...
update-alternatives: using /usr/lib/openblas-base/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
update-alternatives: using /usr/lib/openblas-base/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up liblapack3 (3.6.0-2ubuntu2) ...
Setting up libopenblas-dev (0.2.18-1ubuntu1) ...
update-alternatives: using /usr/lib/openblas-base/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode
update-alternatives: using /usr/lib/openblas-base/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
Setting up liblapack-dev (3.6.0-2ubuntu2) ...
Setting up libpaper-utils (1.1.24+nmu4ubuntu1) ...
Setting up libpython2.7:amd64 (2.7.12-1ubuntu0~16.04.9) ...
Setting up libpython2.7-dev:amd64 (2.7.12-1ubuntu0~16.04.9) ...
Setting up libpython-dev:amd64 (2.7.12-1~16.04) ...
Setting up python2.7-dev (2.7.12-1ubuntu0~16.04.9) ...
Setting up python-dev (2.7.12-1~16.04) ...
Setting up python-tk (2.7.12-1~16.04) ...
Setting up libgtk-3-common (3.18.9-1ubuntu3.3) ...
Setting up libgtk-3-0:amd64 (3.18.9-1ubuntu3.3) ...
Setting up gconf-service (3.2.6-3ubuntu6) ...
Setting up emacs24 (24.5+1-6ubuntu1.1) ...
update-alternatives: using /usr/bin/emacs24-x to provide /usr/bin/emacs (emacs) in auto mode
update-alternatives: using /usr/bin/emacs24 to provide /usr/bin/editor (editor) in auto mode
Install emacsen-common for emacs24
emacsen-common: Handling install of emacsen flavor emacs24
Wrote /etc/emacs24/site-start.d/00debian-vars.elc
Wrote /usr/share/emacs24/site-lisp/debian-startup.elc
Setting up libgtk-3-bin (3.18.9-1ubuntu3.3) ...
Setting up adwaita-icon-theme (3.18.0-2ubuntu3.1) ...
update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode
Setting up gconf-service-backend (3.2.6-3ubuntu6) ...
Setting up humanity-icon-theme (0.6.10.1) ...
Setting up ubuntu-mono (14.04+16.04.20180326-0ubuntu1) ...
Processing triggers for libc-bin (2.23-0ubuntu11) ...
Processing triggers for systemd (229-4ubuntu21.27) ...
Processing triggers for sgml-base (1.26+nmu4ubuntu1) ...
Processing triggers for libgdk-pixbuf2.0-0:amd64 (2.32.2-1ubuntu1.6) ...
Processing triggers for dbus (1.10.6-1ubuntu3.5) ...
Removing intermediate container f918d957f201
---> 4a672475ce11
Step 4/31 : USER root
---> Running in de624045581f
Removing intermediate container de624045581f
---> c4ba04011131
Step 5/31 : ENV CUDA_ROOT /usr/local/cuda/bin
---> Running in 76f482332217
Removing intermediate container 76f482332217
---> 40a2195db5e5
Step 6/31 : RUN curl -LO http://repo.continuum.io/miniconda/Miniconda-latest-Linux-x86_64.sh
---> Running in 774e60382cfe
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 25.9M 100 25.9M 0 0 9010k 0 0:00:02 0:00:02 --:--:-- 10.3M
Removing intermediate container 774e60382cfe
---> 174612a09ed3
Step 7/31 : RUN bash Miniconda-latest-Linux-x86_64.sh -p /miniconda -b
---> Running in cd449f2765ef
PREFIX=/miniconda
installing: _cache-0.0-py27_x0 ...
installing: python-2.7.11-0 ...
installing: conda-env-2.4.5-py27_0 ...
installing: openssl-1.0.2g-0 ...
installing: pycosat-0.6.1-py27_0 ...
installing: pyyaml-3.11-py27_1 ...
installing: readline-6.2-2 ...
installing: requests-2.9.1-py27_0 ...
installing: sqlite-3.9.2-0 ...
installing: tk-8.5.18-0 ...
installing: yaml-0.1.6-0 ...
installing: zlib-1.2.8-0 ...
installing: conda-4.0.5-py27_0 ...
installing: pycrypto-2.6.1-py27_0 ...
installing: pip-8.1.1-py27_1 ...
installing: wheel-0.29.0-py27_0 ...
installing: setuptools-20.3-py27_0 ...
Python 2.7.11 :: Continuum Analytics, Inc.
creating default environment...
installation finished.
Removing intermediate container cd449f2765ef
---> ace2efb24a30
Step 8/31 : RUN rm /Miniconda-latest-Linux-x86_64.sh
---> Running in 154303e85375
Removing intermediate container 154303e85375
---> bb414e828d1b
Step 9/31 : ENV PATH=/miniconda/bin:${PATH}
---> Running in 0b86ca1d03c1
Removing intermediate container 0b86ca1d03c1
---> c83dea58e496
Step 10/31 : RUN conda update -y conda
---> Running in 2456f2cdeca0
Fetching package metadata: ....
.Solving package specifications: .........
Package plan for installation in environment /miniconda:
The following packages will be downloaded:
package | build
---------------------------|-----------------
conda-env-2.6.0 | 0 502 B
libffi-3.2.1 | 1 38 KB
sqlite-3.13.0 | 0 4.0 MB
python-2.7.13 | 0 11.5 MB
asn1crypto-0.22.0 | py27_0 145 KB
enum34-1.1.6 | py27_0 53 KB
idna-2.6 | py27_0 122 KB
ipaddress-1.0.18 | py27_0 31 KB
pycparser-2.18 | py27_0 165 KB
pyparsing-2.2.0 | py27_0 94 KB
requests-2.12.4 | py27_0 762 KB
ruamel_yaml-0.11.14 | py27_1 361 KB
six-1.10.0 | py27_0 16 KB
cffi-1.10.0 | py27_0 329 KB
packaging-16.8 | py27_0 30 KB
cryptography-1.8.1 | py27_0 850 KB
pyopenssl-17.0.0 | py27_0 74 KB
conda-4.3.30 | py27h6ae6dc7_0 507 KB
------------------------------------------------------------
Total: 19.0 MB
The following NEW packages will be INSTALLED:
asn1crypto: 0.22.0-py27_0
cffi: 1.10.0-py27_0
cryptography: 1.8.1-py27_0
enum34: 1.1.6-py27_0
idna: 2.6-py27_0
ipaddress: 1.0.18-py27_0
libffi: 3.2.1-1
packaging: 16.8-py27_0
pycparser: 2.18-py27_0
pyopenssl: 17.0.0-py27_0
pyparsing: 2.2.0-py27_0
ruamel_yaml: 0.11.14-py27_1
six: 1.10.0-py27_0
The following packages will be UPDATED:
conda: 4.0.5-py27_0 --> 4.3.30-py27h6ae6dc7_0
conda-env: 2.4.5-py27_0 --> 2.6.0-0
python: 2.7.11-0 --> 2.7.13-0
requests: 2.9.1-py27_0 --> 2.12.4-py27_0
sqlite: 3.9.2-0 --> 3.13.0-0
Fetching packages ...
conda-env-2.6. 100% |###############################| Time: 0:00:00 359.86 kB/s
libffi-3.2.1-1 100% |###############################| Time: 0:00:00 14.36 MB/s
sqlite-3.13.0- 100% |###############################| Time: 0:00:00 10.84 MB/s
python-2.7.13- 100% |###############################| Time: 0:00:01 9.76 MB/s
asn1crypto-0.2 100% |###############################| Time: 0:00:00 5.43 MB/s
enum34-1.1.6-p 100% |###############################| Time: 0:00:00 16.27 MB/s
idna-2.6-py27_ 100% |###############################| Time: 0:00:00 7.17 MB/s
ipaddress-1.0. 100% |###############################| Time: 0:00:00 14.37 MB/s
pycparser-2.18 100% |###############################| Time: 0:00:00 5.53 MB/s
pyparsing-2.2. 100% |###############################| Time: 0:00:00 4.82 MB/s
requests-2.12. 100% |###############################| Time: 0:00:00 9.11 MB/s
ruamel_yaml-0. 100% |###############################| Time: 0:00:00 3.39 MB/s
six-1.10.0-py2 100% |###############################| Time: 0:00:00 8.09 MB/s
cffi-1.10.0-py 100% |###############################| Time: 0:00:00 8.01 MB/s
packaging-16.8 100% |###############################| Time: 0:00:00 12.15 MB/s
cryptography-1 100% |###############################| Time: 0:00:00 8.69 MB/s
pyopenssl-17.0 100% |###############################| Time: 0:00:00 6.24 MB/s
conda-4.3.30-p 100% |###############################| Time: 0:00:00 7.71 MB/s
Extracting packages ...
[ COMPLETE ]|##################################################| 100%
Unlinking packages ...
[ COMPLETE ]|##################################################| 100%
Linking packages ...
[ COMPLETE ]|##################################################| 100%
Removing intermediate container 2456f2cdeca0
---> 9f305c6c6f6d
Step 11/31 : ADD requirements.txt /requirements.txt
---> 48fd93163eb7
Step 12/31 : RUN conda install numpy scipy mkl
---> Running in d0aab32e91b7
Fetching package metadata ...........
Solving package specifications: .
Package plan for installation in environment /miniconda:
The following NEW packages will be INSTALLED:
_libgcc_mutex: 0.1-main
blas: 1.0-mkl
certifi: 2019.11.28-py27_0
chardet: 3.0.4-py27_1003
conda-package-handling: 1.6.0-py27h7b6447c_0
futures: 3.3.0-py27_0
intel-openmp: 2020.0-166
libgcc-ng: 9.1.0-hdf63c60_0
libgfortran-ng: 7.3.0-hdf63c60_0
libstdcxx-ng: 9.1.0-hdf63c60_0
mkl: 2020.0-166
mkl-service: 2.3.0-py27he904b0f_0
mkl_fft: 1.0.15-py27ha843d7b_0
mkl_random: 1.1.0-py27hd6b4f25_0
numpy: 1.16.6-py27hbc911f0_0
numpy-base: 1.16.6-py27hde5b4d6_0
pysocks: 1.7.1-py27_0
scipy: 1.2.1-py27h7c811a0_0
tqdm: 4.42.0-py_0
urllib3: 1.25.7-py27_0
The following packages will be UPDATED:
conda: 4.3.30-py27h6ae6dc7_0 --> 4.8.2-py27_0
conda-env: 2.6.0-0 --> 2.6.0-1
pycosat: 0.6.1-py27_0 --> 0.6.3-py27h7b6447c_0
requests: 2.12.4-py27_0 --> 2.22.0-py27_1
setuptools: 20.3-py27_0 --> 44.0.0-py27_0
Proceed ([y]/n)?
_libgcc_mutex- 100% |###############################| Time: 0:00:00 2.34 MB/s
blas-1.0-mkl.t 100% |###############################| Time: 0:00:00 5.26 MB/s
conda-env-2.6. 100% |###############################| Time: 0:00:00 3.00 MB/s
intel-openmp-2 100% |###############################| Time: 0:00:00 8.18 MB/s
libgfortran-ng 100% |###############################| Time: 0:00:00 11.35 MB/s
libstdcxx-ng-9 100% |###############################| Time: 0:00:00 11.58 MB/s
libgcc-ng-9.1. 100% |###############################| Time: 0:00:00 11.73 MB/s
mkl-2020.0-166 100% |###############################| Time: 0:00:18 11.57 MB/s
certifi-2019.1 100% |###############################| Time: 0:00:00 14.01 MB/s
chardet-3.0.4- 100% |###############################| Time: 0:00:00 11.00 MB/s
futures-3.3.0- 100% |###############################| Time: 0:00:00 17.59 MB/s
pycosat-0.6.3- 100% |###############################| Time: 0:00:00 13.87 MB/s
pysocks-1.7.1- 100% |###############################| Time: 0:00:00 18.64 MB/s
tqdm-4.42.0-py 100% |###############################| Time: 0:00:00 18.50 MB/s
conda-package- 100% |###############################| Time: 0:00:00 10.49 MB/s
mkl-service-2. 100% |###############################| Time: 0:00:00 13.49 MB/s
setuptools-44. 100% |###############################| Time: 0:00:00 11.97 MB/s
numpy-base-1.1 100% |###############################| Time: 0:00:00 11.45 MB/s
urllib3-1.25.7 100% |###############################| Time: 0:00:00 12.68 MB/s
requests-2.22. 100% |###############################| Time: 0:00:00 11.06 MB/s
conda-4.8.2-py 100% |###############################| Time: 0:00:00 11.44 MB/s
mkl_fft-1.0.15 100% |###############################| Time: 0:00:00 13.67 MB/s
mkl_random-1.1 100% |###############################| Time: 0:00:00 4.68 MB/s
numpy-1.16.6-p 100% |###############################| Time: 0:00:00 17.43 MB/s
scipy-1.2.1-py 100% |###############################| Time: 0:00:03 5.40 MB/s
Removing intermediate container d0aab32e91b7
---> 495ec8b9449a
Step 13/31 : RUN pip install pip --upgrade
---> Running in e55ed6ec1618
Collecting pip
Downloading https://files.pythonhosted.org/packages/54/0c/d01aa759fdc501a58f431eb594a17495f15b88da142ce14b5845662c13f3/pip-20.0.2-py2.py3-none-any.whl (1.4MB)
Installing collected packages: pip
Found existing installation: pip 8.1.1
Uninstalling pip-8.1.1:
Successfully uninstalled pip-8.1.1
Successfully installed pip-20.0.2
Removing intermediate container e55ed6ec1618
---> f0c3d6d2fe5f
Step 14/31 : RUN pip install tensorflow-gpu==1.6.0
---> Running in 5c11c0c6eff0
DEPRECATION: Python 2.7 reached the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 is no longer maintained. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support
Collecting tensorflow-gpu==1.6.0
Downloading tensorflow_gpu-1.6.0-cp27-cp27mu-manylinux1_x86_64.whl (209.2 MB)
Collecting backports.weakref>=1.0rc1
Downloading backports.weakref-1.0.post1-py2.py3-none-any.whl (5.2 kB)
Collecting astor>=0.6.0
Downloading astor-0.8.1-py2.py3-none-any.whl (27 kB)
Collecting absl-py>=0.1.6
Downloading absl-py-0.9.0.tar.gz (104 kB)
Collecting gast>=0.2.0
Downloading gast-0.3.3-py2.py3-none-any.whl (9.7 kB)
Requirement already satisfied: wheel in /miniconda/lib/python2.7/site-packages (from tensorflow-gpu==1.6.0) (0.29.0)
Requirement already satisfied: enum34>=1.1.6 in /miniconda/lib/python2.7/site-packages (from tensorflow-gpu==1.6.0) (1.1.6)
Collecting grpcio>=1.8.6
Downloading grpcio-1.26.0-cp27-cp27mu-manylinux2010_x86_64.whl (2.4 MB)
Collecting mock>=2.0.0
Downloading mock-3.0.5-py2.py3-none-any.whl (25 kB)
Collecting termcolor>=1.1.0
Downloading termcolor-1.1.0.tar.gz (3.9 kB)
Collecting protobuf>=3.4.0
Downloading protobuf-3.11.3-cp27-cp27mu-manylinux1_x86_64.whl (1.3 MB)
Requirement already satisfied: six>=1.10.0 in /miniconda/lib/python2.7/site-packages (from tensorflow-gpu==1.6.0) (1.10.0)
Collecting tensorboard<1.7.0,>=1.6.0
Downloading tensorboard-1.6.0-py2-none-any.whl (3.0 MB)
Requirement already satisfied: numpy>=1.13.3 in /miniconda/lib/python2.7/site-packages (from tensorflow-gpu==1.6.0) (1.16.6)
Requirement already satisfied: futures>=2.2.0; python_version < "3.2" in /miniconda/lib/python2.7/site-packages (from grpcio>=1.8.6->tensorflow-gpu==1.6.0) (3.3.0)
Collecting funcsigs>=1; python_version < "3.3"
Downloading funcsigs-1.0.2-py2.py3-none-any.whl (17 kB)
Requirement already satisfied: setuptools in /miniconda/lib/python2.7/site-packages (from protobuf>=3.4.0->tensorflow-gpu==1.6.0) (44.0.0.post20200106)
Collecting werkzeug>=0.11.10
Downloading Werkzeug-1.0.0-py2.py3-none-any.whl (298 kB)
Collecting bleach==1.5.0
Downloading bleach-1.5.0-py2.py3-none-any.whl (17 kB)
Collecting markdown>=2.6.8
Downloading Markdown-3.1.1-py2.py3-none-any.whl (87 kB)
Collecting html5lib==0.9999999
Downloading html5lib-0.9999999.tar.gz (889 kB)
Building wheels for collected packages: absl-py, termcolor, html5lib
Building wheel for absl-py (setup.py): started
Building wheel for absl-py (setup.py): finished with status 'done'
Created wheel for absl-py: filename=absl_py-0.9.0-py2-none-any.whl size=119397 sha256=d6444e3fab116580625b6f7bdd003224cbbdf63f413b3dc384b2b42843b4c8a4
Stored in directory: /root/.cache/pip/wheels/37/83/b0/40d9e9f3d5a7021dfda2f3ea1f0088235679cd7747761c7b93
Building wheel for termcolor (setup.py): started
Building wheel for termcolor (setup.py): finished with status 'done'
Created wheel for termcolor: filename=termcolor-1.1.0-py2-none-any.whl size=5680 sha256=a05468c721f601203d05d064213bc7bacc1330977e4da98241ab186160938b3a
Stored in directory: /root/.cache/pip/wheels/48/54/87/2f4d1a48c87e43906477a3c93d9663c49ca092046d5a4b00b4
Building wheel for html5lib (setup.py): started
Building wheel for html5lib (setup.py): finished with status 'done'
Created wheel for html5lib: filename=html5lib-0.9999999-py2-none-any.whl size=111295 sha256=d1523763c9125de764660aec601258b6cb8ba0b658f03ac05d0e384339a59701
Stored in directory: /root/.cache/pip/wheels/57/cc/a0/fbe3b508c937e8b5c85d75423be716e7f0c0413676db93b334
Successfully built absl-py termcolor html5lib
Installing collected packages: backports.weakref, astor, absl-py, gast, grpcio, funcsigs, mock, termcolor, protobuf, werkzeug, html5lib, bleach, markdown, tensorboard, tensorflow-gpu
Successfully installed absl-py-0.9.0 astor-0.8.1 backports.weakref-1.0.post1 bleach-1.5.0 funcsigs-1.0.2 gast-0.3.3 grpcio-1.26.0 html5lib-0.9999999 markdown-3.1.1 mock-3.0.5 protobuf-3.11.3 tensorboard-1.6.0 tensorflow-gpu-1.6.0 termcolor-1.1.0 werkzeug-1.0.0
Removing intermediate container 5c11c0c6eff0
---> a63d84c19601
Step 15/31 : RUN pip install -r /requirements.txt
---> Running in f0d3ac31b24d
DEPRECATION: Python 2.7 reached the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 is no longer maintained. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support
Collecting h5py
Downloading h5py-2.10.0-cp27-cp27mu-manylinux1_x86_64.whl (2.8 MB)
Collecting MedPy==0.3.0
Downloading MedPy-0.3.0.tar.gz (163 kB)
Collecting scipy==1.0.0
Downloading scipy-1.0.0-cp27-cp27mu-manylinux1_x86_64.whl (46.7 MB)
Collecting Keras==2.0.0
Downloading Keras-2.0.0.tar.gz (191 kB)
Collecting nibabel==2.1.0
Downloading nibabel-2.1.0.tar.gz (3.6 MB)
Collecting numpy==1.13.3
Downloading numpy-1.13.3-cp27-cp27mu-manylinux1_x86_64.whl (16.6 MB)
Collecting Pillow==5.0.0
Downloading Pillow-5.0.0-cp27-cp27mu-manylinux1_x86_64.whl (5.8 MB)
Requirement already satisfied: six in /miniconda/lib/python2.7/site-packages (from h5py->-r /requirements.txt (line 1)) (1.10.0)
Collecting pydicom>=0.9.7
Downloading pydicom-1.4.1-py2.py3-none-any.whl (35.1 MB)
Collecting tensorflow
Downloading tensorflow-2.1.0-cp27-cp27mu-manylinux2010_x86_64.whl (421.8 MB)
Requirement already satisfied: pyyaml in /miniconda/lib/python2.7/site-packages (from Keras==2.0.0->-r /requirements.txt (line 4)) (3.11)
Collecting keras-preprocessing>=1.1.0
Downloading Keras_Preprocessing-1.1.0-py2.py3-none-any.whl (41 kB)
Requirement already satisfied: wheel; python_version < "3" in /miniconda/lib/python2.7/site-packages (from tensorflow->Keras==2.0.0->-r /requirements.txt (line 4)) (0.29.0)
Requirement already satisfied: astor>=0.6.0 in /miniconda/lib/python2.7/site-packages (from tensorflow->Keras==2.0.0->-r /requirements.txt (line 4)) (0.8.1)
Requirement already satisfied: grpcio>=1.8.6 in /miniconda/lib/python2.7/site-packages (from tensorflow->Keras==2.0.0->-r /requirements.txt (line 4)) (1.26.0)
Collecting tensorboard<2.2.0,>=2.1.0
Downloading tensorboard-2.1.0-py2-none-any.whl (3.8 MB)
Requirement already satisfied: backports.weakref>=1.0rc1; python_version < "3.4" in /miniconda/lib/python2.7/site-packages (from tensorflow->Keras==2.0.0->-r /requirements.txt (line 4)) (1.0.post1)
Requirement already satisfied: mock>=2.0.0; python_version < "3" in /miniconda/lib/python2.7/site-packages (from tensorflow->Keras==2.0.0->-r /requirements.txt (line 4)) (3.0.5)
Collecting tensorflow-estimator<2.2.0,>=2.1.0rc0
Downloading tensorflow_estimator-2.1.0-py2.py3-none-any.whl (448 kB)
Collecting gast==0.2.2
Downloading gast-0.2.2.tar.gz (10 kB)
Requirement already satisfied: enum34>=1.1.6; python_version < "3.4" in /miniconda/lib/python2.7/site-packages (from tensorflow->Keras==2.0.0->-r /requirements.txt (line 4)) (1.1.6)
Collecting opt-einsum>=2.3.2
Downloading opt_einsum-2.3.2.tar.gz (59 kB)
Requirement already satisfied: termcolor>=1.1.0 in /miniconda/lib/python2.7/site-packages (from tensorflow->Keras==2.0.0->-r /requirements.txt (line 4)) (1.1.0)
Collecting google-pasta>=0.1.6
Downloading google_pasta-0.1.8-py2-none-any.whl (57 kB)
Requirement already satisfied: absl-py>=0.7.0 in /miniconda/lib/python2.7/site-packages (from tensorflow->Keras==2.0.0->-r /requirements.txt (line 4)) (0.9.0)
Collecting wrapt>=1.11.1
Downloading wrapt-1.11.2.tar.gz (27 kB)
Collecting functools32>=3.2.3; python_version < "3"
Downloading functools32-3.2.3-2.tar.gz (31 kB)
Collecting keras-applications>=1.0.8
Downloading Keras_Applications-1.0.8.tar.gz (289 kB)
Requirement already satisfied: protobuf>=3.8.0 in /miniconda/lib/python2.7/site-packages (from tensorflow->Keras==2.0.0->-r /requirements.txt (line 4)) (3.11.3)
Requirement already satisfied: futures>=2.2.0; python_version < "3.2" in /miniconda/lib/python2.7/site-packages (from grpcio>=1.8.6->tensorflow->Keras==2.0.0->-r /requirements.txt (line 4)) (3.3.0)
Requirement already satisfied: requests<3,>=2.21.0 in /miniconda/lib/python2.7/site-packages (from tensorboard<2.2.0,>=2.1.0->tensorflow->Keras==2.0.0->-r /requirements.txt (line 4)) (2.22.0)
Requirement already satisfied: markdown>=2.6.8 in /miniconda/lib/python2.7/site-packages (from tensorboard<2.2.0,>=2.1.0->tensorflow->Keras==2.0.0->-r /requirements.txt (line 4)) (3.1.1)
Collecting google-auth<2,>=1.6.3
Downloading google_auth-1.11.0-py2.py3-none-any.whl (76 kB)
Collecting google-auth-oauthlib<0.5,>=0.4.1
Downloading google_auth_oauthlib-0.4.1-py2.py3-none-any.whl (18 kB)
Requirement already satisfied: werkzeug>=0.11.15 in /miniconda/lib/python2.7/site-packages (from tensorboard<2.2.0,>=2.1.0->tensorflow->Keras==2.0.0->-r /requirements.txt (line 4)) (1.0.0)
Requirement already satisfied: setuptools>=41.0.0 in /miniconda/lib/python2.7/site-packages (from tensorboard<2.2.0,>=2.1.0->tensorflow->Keras==2.0.0->-r /requirements.txt (line 4)) (44.0.0.post20200106)
Requirement already satisfied: funcsigs>=1; python_version < "3.3" in /miniconda/lib/python2.7/site-packages (from mock>=2.0.0; python_version < "3"->tensorflow->Keras==2.0.0->-r /requirements.txt (line 4)) (1.0.2)
Requirement already satisfied: certifi>=2017.4.17 in /miniconda/lib/python2.7/site-packages (from requests<3,>=2.21.0->tensorboard<2.2.0,>=2.1.0->tensorflow->Keras==2.0.0->-r /requirements.txt (line 4)) (2019.11.28)
Requirement already satisfied: urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1 in /miniconda/lib/python2.7/site-packages (from requests<3,>=2.21.0->tensorboard<2.2.0,>=2.1.0->tensorflow->Keras==2.0.0->-r /requirements.txt (line 4)) (1.25.7)
Requirement already satisfied: chardet<3.1.0,>=3.0.2 in /miniconda/lib/python2.7/site-packages (from requests<3,>=2.21.0->tensorboard<2.2.0,>=2.1.0->tensorflow->Keras==2.0.0->-r /requirements.txt (line 4)) (3.0.4)
Requirement already satisfied: idna<2.9,>=2.5 in /miniconda/lib/python2.7/site-packages (from requests<3,>=2.21.0->tensorboard<2.2.0,>=2.1.0->tensorflow->Keras==2.0.0->-r /requirements.txt (line 4)) (2.6)
Collecting pyasn1-modules>=0.2.1
Downloading pyasn1_modules-0.2.8-py2.py3-none-any.whl (155 kB)
Collecting cachetools<5.0,>=2.0.0
Downloading cachetools-3.1.1-py2.py3-none-any.whl (11 kB)
Collecting rsa<4.1,>=3.1.4
Downloading rsa-4.0-py2.py3-none-any.whl (38 kB)
Collecting requests-oauthlib>=0.7.0
Downloading requests_oauthlib-1.3.0-py2.py3-none-any.whl (23 kB)
Collecting pyasn1<0.5.0,>=0.4.6
Downloading pyasn1-0.4.8-py2.py3-none-any.whl (77 kB)
Collecting oauthlib>=3.0.0
Downloading oauthlib-3.1.0-py2.py3-none-any.whl (147 kB)
Building wheels for collected packages: MedPy, Keras, nibabel, gast, opt-einsum, wrapt, functools32, keras-applications
Building wheel for MedPy (setup.py): started
Building wheel for MedPy (setup.py): finished with status 'done'
Created wheel for MedPy: filename=MedPy-0.3.0-py2-none-any.whl size=229232 sha256=7acff076f179702e727123843505f67d799fcdcb04e65367a2bf9fbd07f4f8a2
Stored in directory: /root/.cache/pip/wheels/48/e3/9c/cb03a1bbbf6eccc46bcc236b8ebe528139e1ce4e73d074ec3c
Building wheel for Keras (setup.py): started
Building wheel for Keras (setup.py): finished with status 'done'
Created wheel for Keras: filename=Keras-2.0.0-py2-none-any.whl size=228805 sha256=698d3edb8c685113e7a9d2a7403bd19f90aa489f00999419fab1982aa0491491
Stored in directory: /root/.cache/pip/wheels/44/c7/24/b1ee228bb680f5ed9c7079df99a288c3e670e06c79a52b99b4
Building wheel for nibabel (setup.py): started
Building wheel for nibabel (setup.py): finished with status 'done'
Created wheel for nibabel: filename=nibabel-2.1.0-py2-none-any.whl size=2712437 sha256=92ed2c482534e93077ab9d916a8ba168cc071a12853f2fcc4a1ce3ae98e5f264
Stored in directory: /root/.cache/pip/wheels/37/8e/3a/f63774ae1ea5139a2aff78576a469ebb0f2a5f2470abdf2006
Building wheel for gast (setup.py): started
Building wheel for gast (setup.py): finished with status 'done'
Created wheel for gast: filename=gast-0.2.2-py2-none-any.whl size=7633 sha256=b493f33c4e02c027ee027026b22ca8bf04d7fa9aab1b31342da7b7adfca142a4
Stored in directory: /root/.cache/pip/wheels/0f/10/f7/29260ef8a721b90061c8c70a4f0130a64036e8dafe15acc097
Building wheel for opt-einsum (setup.py): started
Building wheel for opt-einsum (setup.py): finished with status 'done'
Created wheel for opt-einsum: filename=opt_einsum-2.3.2-py2-none-any.whl size=52339 sha256=037af86bba738c406f32edf3e5895c238afdd78e5e6d4babf99345b9e4d88527
Stored in directory: /root/.cache/pip/wheels/ef/c4/c2/d0b07dd2a54f4d583a5de0e6ce5eb7a1832961b9a10d1ec953
Building wheel for wrapt (setup.py): started
Building wheel for wrapt (setup.py): finished with status 'done'
Created wheel for wrapt: filename=wrapt-1.11.2-cp27-cp27mu-linux_x86_64.whl size=65361 sha256=afa0ddfabaf026d832887b7134c6ecca251fe2f8fc1ea5ddee9a122b4ab837eb
Stored in directory: /root/.cache/pip/wheels/aa/0a/cb/e31e525e074359f542ff2240747f3d4cc1dad9c895bb6df70c
Building wheel for functools32 (setup.py): started
Building wheel for functools32 (setup.py): finished with status 'done'
Created wheel for functools32: filename=functools32-3.2.3.post2-py2-none-any.whl size=10943 sha256=8770ae618b8906369d48e750e52ee905f70d5ca6da1aec8ca31f3609870b5d8f
Stored in directory: /root/.cache/pip/wheels/c2/ea/a3/25af52265fad6418a74df0b8d9ca8b89e0b3735dbd4d0d3794
Building wheel for keras-applications (setup.py): started
Building wheel for keras-applications (setup.py): finished with status 'done'
Created wheel for keras-applications: filename=Keras_Applications-1.0.8-py2-none-any.whl size=50942 sha256=db23a1b42d5158a5ea72aa0a83d33cb67a9a61bd7515834585aa7700e21ee344
Stored in directory: /root/.cache/pip/wheels/71/a0/64/e2e0c93740e0460f4b7f036141b7c73b5e44ff38f690ddff9f
Successfully built MedPy Keras nibabel gast opt-einsum wrapt functools32 keras-applications
ERROR: tensorflow-gpu 1.6.0 has requirement tensorboard<1.7.0,>=1.6.0, but you'll have tensorboard 2.1.0 which is incompatible.
ERROR: tensorflow 2.1.0 has requirement numpy<2.0,>=1.16.0, but you'll have numpy 1.13.3 which is incompatible.
ERROR: tensorflow 2.1.0 has requirement scipy==1.2.2; python_version < "3", but you'll have scipy 1.0.0 which is incompatible.
ERROR: tensorflow 2.1.0 has requirement six>=1.12.0, but you'll have six 1.10.0 which is incompatible.
Installing collected packages: numpy, h5py, scipy, nibabel, pydicom, MedPy, keras-preprocessing, pyasn1, pyasn1-modules, cachetools, rsa, google-auth, oauthlib, requests-oauthlib, google-auth-oauthlib, tensorboard, tensorflow-estimator, gast, opt-einsum, google-pasta, wrapt, functools32, keras-applications, tensorflow, Keras, Pillow
Attempting uninstall: numpy
Found existing installation: numpy 1.16.6
Uninstalling numpy-1.16.6:
Successfully uninstalled numpy-1.16.6
Attempting uninstall: scipy
Found existing installation: scipy 1.2.1
Uninstalling scipy-1.2.1:
Successfully uninstalled scipy-1.2.1
Attempting uninstall: tensorboard
Found existing installation: tensorboard 1.6.0
Uninstalling tensorboard-1.6.0:
Successfully uninstalled tensorboard-1.6.0
Attempting uninstall: gast
Found existing installation: gast 0.3.3
Uninstalling gast-0.3.3:
Successfully uninstalled gast-0.3.3
Successfully installed Keras-2.0.0 MedPy-0.3.0 Pillow-5.0.0 cachetools-3.1.1 functools32-3.2.3.post2 gast-0.2.2 google-auth-1.11.0 google-auth-oauthlib-0.4.1 google-pasta-0.1.8 h5py-2.10.0 keras-applications-1.0.8 keras-preprocessing-1.1.0 nibabel-2.1.0 numpy-1.13.3 oauthlib-3.1.0 opt-einsum-2.3.2 pyasn1-0.4.8 pyasn1-modules-0.2.8 pydicom-1.4.1 requests-oauthlib-1.3.0 rsa-4.0 scipy-1.0.0 tensorboard-2.1.0 tensorflow-2.1.0 tensorflow-estimator-2.1.0 wrapt-1.11.2
Removing intermediate container f0d3ac31b24d
---> ef61535808b1
Step 16/31 : RUN useradd -ms /bin/bash docker
---> Running in 6df6b6d0f7a8
Removing intermediate container 6df6b6d0f7a8
---> c4930f660623
Step 17/31 : ENV HOME /home/docker
---> Running in ebfbaaa02beb
Removing intermediate container ebfbaaa02beb
---> dfed1651f60f
Step 18/31 : RUN mkdir $HOME/src
---> Running in 9d636888faab
Removing intermediate container 9d636888faab
---> 81d96d3bd6be
Step 19/31 : RUN mkdir /data
---> Running in 5c3501d64af7
Removing intermediate container 5c3501d64af7
---> 37d74d053f03
Step 20/31 : ENV PATH=/$HOME/src:${PATH}
---> Running in 96df958d7226
Removing intermediate container 96df958d7226
---> d05235bc5751
Step 21/31 : ADD __init__.py $HOME/src/
---> 7a0ae1771f8a
Step 22/31 : ADD .keras $HOME/.keras
ADD failed: stat /var/lib/docker/tmp/docker-builder587429593/.keras: no such file or directory
Hi @arthursw
I will work on this as soon as possible 🙏
Same issue here
Sorry all @colpark and @arthursw. 🙏 🙏
I have been pretty busy lately with the COVID thing and the kids etc.... I will look at it as soon as I can but Ii think that the easy thing to do meanwhile is to use the pre-compiled docker version from here:
https://github.com/NIC-VICOROB/nic_tools/tree/master/nicMSlesions