Import fails with root 6.08 release candidate
maxnoe opened this issue · comments
Today I tried installing root_numpy with the relase candidate for 6.08 (python 3 bug fix)
When I try to import root_numpy, I get:
In [1]: import root_numpy
---------------------------------------------------------------------------
ImportError Traceback (most recent call last)
<ipython-input-1-dcbd7d82c6fe> in <module>()
----> 1 import root_numpy
/home/smd/.local/anaconda3/lib/python3.5/site-packages/root_numpy/__init__.py in <module>()
38 del numpy_version_at_install
39
---> 40 from ._tree import (
41 root2array, root2rec,
42 tree2array, tree2rec,
/home/smd/.local/root6/lib/ROOT.py in _importhook(name, *args, **kwds)
301 except Exception:
302 pass
--> 303 return _orig_ihook( name, *args, **kwds )
304
305 __builtin__.__import__ = _importhook
/home/smd/.local/anaconda3/lib/python3.5/site-packages/root_numpy/_tree.py in <module>()
4
5 from .extern.six import string_types
----> 6 from . import _librootnumpy
7
8
/home/smd/.local/root6/lib/ROOT.py in _importhook(name, *args, **kwds)
301 except Exception:
302 pass
--> 303 return _orig_ihook( name, *args, **kwds )
304
305 __builtin__.__import__ = _importhook
/home/smd/.local/root6/lib/ROOT.py in _importhook(name, *args, **kwds)
301 except Exception:
302 pass
--> 303 return _orig_ihook( name, *args, **kwds )
304
305 __builtin__.__import__ = _importhook
ImportError: /home/smd/.local/anaconda3/lib/python3.5/site-packages/root_numpy/_librootnumpy.cpython-35m-x86_64-linux-gnu.so: undefined symbol: _ZN10TClassEdit14ResolveTypedefEPKcb
Building that ROOT release now to check
Actually, I'm not seeing this problem. Did you check that you in fact uninstalled root_numpy before building it from scratch again and reinstalling it?
"undefined symbol" typically means it's still the old .so that was built against the previous version of ROOT you had.
I made sure I uninstall root_numpy. I also tried with a fresh conda environment.
Sorry, my bad. It was the pip cache. I had to reinstall with pip install --no-cache root_numpy. Uninstall is not enough as then only the already built wheel is used.