MANTA
MANTA (Microbiota And pheNotype correlaTion Analysis platform) is an integrative database and analysis platform that relates microbiome and phenotypic data. MANTA is a web application that works on most of the modern web browsers.
The application was developed using the Google Web Tookit. The database used for store the data is PostgreSQL. We use Tomcat as the application container. Some calculations rely on R and need some R libraries including ade4 and RServ.
An example database which contains 20 samples could be found at our web site.
System requirement
Java, Apache Tomcat, PostgreSQL, R
How to use
- The database schema and a script to create the necessary tables could be found in the document folder.
- Import your microbiota and phenotype data into the corresponding tables.
- Some configuration is needed; especially those settings in gutflora.db.properties, GutFloraConfig.java.
- Compile the GWT project and release to Tomcat.
- More details will be available later.
Copyright and License
Copyright (C) 2019 The Mizuguchi Laboratory
MANTA is licensed under the MIT License. See LICENSE file for licensing information.