saskiad

AMATH_BrainObservatory_Tutorial

Tutorials for accessing data from Allen Brain Observatory and computing visual responses of neurons for undergrad computational neuroscience course

StimTable

Creates a dict of stimulus tables (as Pandas DataFrames) from stim.pkl and sync.h5 files.

awesome-public-datasets

A topic-centric list of high-quality open datasets in public domains. Propose NEW data ☛☛☛PR☛☛☛

brain_observatory_examples

Gallery of visualizations and analyses of the Allen Brain Observatory

CNS_2018_Tutorial

Material for CNS Tutorial on Allen Brain Observatory and BMTK

Contrast_Analysis

code for elife paper using dandiset

Contrast_Analysis_internal

direction_flipping

openscope_surround

Code for the Openscope Surround project

example-notebooks

DANDI example notebooks

ndx-aind-metadata

openscope_motion

Code used for openscope project characterizing local and global motion responses

ophys_ephys_comparison_paper

Code for generating figures from Siegle, Ledochowitsch et al. (2021) eLife

rastermap

A one-dimensional embedding algorithm for timeseries data

Responsiveness_Analysis

Code used to examine different responsiveness criteria for 2P data

swdb_2017_tools

A collaborative Python package built by participants of the Summer Workshop on the Dynamic Brain

swdb_2018_tools

A collaborative Python package built by participants of the Summer Workshop on the Dynamic Brain

SWDB_2019

Repository for course materials for the Summer Workshop on the Dynamic Brain 2019

swdb_2022

Repository to host materials for the summer workshop on the dynamic brain

swdb_2023

Summer Workshop on the Dynamic Brain 2023

targetedconstrast_nwb

test_repo

vis_coding_lesson

visual_coding_2p_analysis

Visual Coding 2P analysis code