Saskia de Vries's repositories
AMATH_BrainObservatory_Tutorial
Tutorials for accessing data from Allen Brain Observatory and computing visual responses of neurons for undergrad computational neuroscience course
awesome-public-datasets
A topic-centric list of high-quality open datasets in public domains. Propose NEW data ☛☛☛PR☛☛☛
brain_observatory_examples
Gallery of visualizations and analyses of the Allen Brain Observatory
CNS_2018_Tutorial
Material for CNS Tutorial on Allen Brain Observatory and BMTK
Contrast_Analysis
code for elife paper using dandiset
openscope_surround
Code for the Openscope Surround project
example-notebooks
DANDI example notebooks
openscope_motion
Code used for openscope project characterizing local and global motion responses
ophys_ephys_comparison_paper
Code for generating figures from Siegle, Ledochowitsch et al. (2021) eLife
rastermap
A one-dimensional embedding algorithm for timeseries data
Responsiveness_Analysis
Code used to examine different responsiveness criteria for 2P data
swdb_2017_tools
A collaborative Python package built by participants of the Summer Workshop on the Dynamic Brain
swdb_2018_tools
A collaborative Python package built by participants of the Summer Workshop on the Dynamic Brain
SWDB_2019
Repository for course materials for the Summer Workshop on the Dynamic Brain 2019
swdb_2022
Repository to host materials for the summer workshop on the dynamic brain
swdb_2023
Summer Workshop on the Dynamic Brain 2023
visual_coding_2p_analysis
Visual Coding 2P analysis code