Sam Clifford's repositories
mgcv.helper
Helper functions for using mgcv
random-effects-2017
Bayes on the Beach 2017 poster
election2017
Visualisation of the 2017 Qld Election results on an electorate-candidate basis
BDA_course_Aalto
Bayesian Data Analysis course at Aalto
coronavirus-apps
List of coronavirus applications built in response to the 2019-nCov virus from Dec 2019
covidTestVac
SI + code for direct benefit model of COVID test & vaccinate scheme
eda_fev1
Exploratory data analysis of FEV1 in Topeka, Kansas
EpiNow
Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
EpiSoon
Forecasting the effective reproduction number over short timescales
hugo-blog
Hugo version of blog
knitr-examples
A collection of knitr examples
los_review
Code used to produce the results presented in "A rapid review of evidence for hospital length of stay of COVID-19 patients"
PostdocRetreat2017
A place for discussing ideas from the the 2017 postdoc retreat.
psData
An R package to download regularly maintained political science data sets and make commonly used, but infrequently updated variables based on this data.
socialmixr
R package for deriving social mixing matrices from survey data.
spike_sorting_DPM
R code for running Dirichlet Process mixture model for unsupervised spike sorting.
wordpress-to-markdown
Wordpress Export XML converter that outputs Markdown posts
Zmix_devVersion2
code development - not for general use (use Zmix instead)
ZmixHMM
Overfitted Gaussian Hidden Markov models (In progress)