Sam Clifford (samclifford)

samclifford

Geek Repo

Company:London School of Hygiene and Tropical Medicine

Location:London, United Kingdom

Home Page:http://samclifford.info

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Sam Clifford's repositories

mgcv.helper

Helper functions for using mgcv

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2491_eda

LSHTM 2491 Data Challenge Module - Exploratory Data Analysis

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random-effects-2017

Bayes on the Beach 2017 poster

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election2017

Visualisation of the 2017 Qld Election results on an electorate-candidate basis

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2031_eda

LSHTM 2031 Introduction to Statistical Computing Module - Exploratory Data Analysis

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BDA_course_Aalto

Bayesian Data Analysis course at Aalto

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bread

Bread recipes

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coronavirus-apps

List of coronavirus applications built in response to the 2019-nCov virus from Dec 2019

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covidTestVac

SI + code for direct benefit model of COVID test & vaccinate scheme

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dsmcmc

Fast and tidy data frames extracted from mcmc.list

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eda_fev1

Exploratory data analysis of FEV1 in Topeka, Kansas

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EpiNow

Estimate Realtime Case Counts and Time-varying Epidemiological Parameters

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EpiSoon

Forecasting the effective reproduction number over short timescales

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hugo-blog

Hugo version of blog

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jsm2017

jsm2017 paper

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knitr-examples

A collection of knitr examples

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los_review

Code used to produce the results presented in "A rapid review of evidence for hospital length of stay of COVID-19 patients"

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MXB344

Course Materials and Assignments for MXB344

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PostdocRetreat2017

A place for discussing ideas from the the 2017 postdoc retreat.

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psData

An R package to download regularly maintained political science data sets and make commonly used, but infrequently updated variables based on this data.

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socialmixr

R package for deriving social mixing matrices from survey data.

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spike_sorting_DPM

R code for running Dirichlet Process mixture model for unsupervised spike sorting.

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wordpress-to-markdown

Wordpress Export XML converter that outputs Markdown posts

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Zmix

R package for overfitting Bayesian mixture models with an unknown number of components.

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Zmix_devVersion2

code development - not for general use (use Zmix instead)

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ZmixHMM

Overfitted Gaussian Hidden Markov models (In progress)

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