discrepancy in results output

[alessandrapas]

Hi,

I recently re-run Nichenet and I have different results from the first time I run it (several months ago). Do you know what could cause these differences in results?

Thank you

[Chananchida Sang-aram]

Hi,

Did you update from Seurat v4 to v5 by any chance? If the ligand activity prediction results are different, that is most likely the issue. Also see #285 for more info.

[alessandrapas]

Yes, indeed. Thank you for pointing this out to me.