Ryan O. Schenck's repositories
COVID_Hospital
Modeling COVID Spread in the Hospital
IDP_Scripts
Scripts used for Intrinsically Disordered Protein Analysis
VariantFilter
Variant filter for various outputs. These include Octopus, MuTect2, Strelka2, and DRAGEN.
Capsid_IDP_Classifier
Machine Learning Classifier for CRESS-DNA viral capsids
Language:R000
CommandLineHAL
Options to create a HAL command line interface
Language:Java000
DPhilRotation1
Code base for Rotation 1 of Genomic Medicine and Statistics D.Phil
DPhilRotation1Part2
Genetic Analysis of PCAWG dataset. No data stored here at all!!!
Epidermis_Project_Final
Epidermis_Project with the final framework
game_of_life
Side Project fun with Conway's Game of Life
mosaicDesert
Desert artwork for the Mathematical Oncology newsletter
NeoPredPipe-1
Neoantigen Prediction Pipeline using ANNOVAR and netMHCpan
Language:Python000
ROI_DataExtraction_GMSOxford17
Script to pull data from fluorescence microscopy information from ROIs for Cell Imaging Module
rschenck.github.io
Website
TeamOrangeClone
Team Orange Clonal Dynamics Model