Rocke dong's repositories
alphafoldv2.2.0
Open source code for AlphaFold.
AutoNER
Learning Named Entity Tagger from Domain-Specific Dictionary
biobert-pytorch
PyTorch Implementation of BioBERT
bluebert
BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).
Chinese-Annotator
Annotator for Chinese Text Corpus (UNDER DEVELOPMENT) 中文文本标注工具
cs224u
Code for Stanford CS224u
LEBERT
Code for the ACL2021 paper "Lexicon Enhanced Chinese Sequence Labelling Using BERT Adapter"
MedMentions
A corpus of Biomedical papers annotated with mentions of UMLS entities.
NeMo
NeMo: a toolkit for conversational AI
ParallelFold
Modified version of Alphafold to divide CPU part (MSA and template searching) and GPU part. This can accelerate Alphafold when predicting multiple structures
self-attentive-parser
High-accuracy NLP parser with models for 11 languages.
sense2vec
🦆 Contextually-keyed word vectors
spaCy-entity-linker
spaCy module for linking text to Wikidata items
stanza
Official Stanford NLP Python Library for Many Human Languages
torch-rnn
Efficient, reusable RNNs and LSTMs for torch