Ruben Vorderman (rhpvorderman)

rhpvorderman

Geek Repo

Company:@LUMC

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LUMC

Ruben Vorderman's repositories

sequali

Fast sequencing data quality metrics

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fastqdedup

Alignment-free FASTQ deduplication.

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cutadapt

cutadapt removes adapter sequences from sequencing reads

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tools-iuc

Tool Shed repositories maintained by the Intergalactic Utilities Commission

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ansible-galaxy

An Ansible role for managing a Galaxy server

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bioconda-recipes

Conda recipes for the bioconda channel.

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cpython

The Python programming language

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dnaio

Read and write FASTQ and FASTA

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docker-minimum-base

Attempt to build a smalll base for biocontainers using libc,coreutils,bash and busybox

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htslib

C library for high-throughput sequencing data formats

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htspy

Fast pythonic BAM processing according to the HTS format specifications..

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isa-l

Intelligent Storage Acceleration Library

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isa-l-feedstock

A conda-smithy repository for isa-l.

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midi-organ-project

Creating a full foot pedal for a MIDI organ

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miniwdl

A static analysis toolkit for the Workflow Description Language

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MultiQC

Aggregate results from bioinformatics analyses across many samples into a single report.

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murmur3

Murmur3 hash in C

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nasm-feedstock

A conda-smithy repository for nasm.

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phred-to-error-rate

Convert FASTQ phred scores to probabilities

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pygal

PYthon svg GrAph plotting Library

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python-isal-feedstock

A conda-smithy repository for python-isal.

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staged-recipes

A place to submit conda recipes before they become fully fledged conda-forge feedstocks

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test-data

Test data for MultiQC.

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vcf-compare

WDL pipeline for comparing multiple VCF pairs

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xopen

Open any compressed file in Python

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xopen-feedstock

A conda-smithy repository for xopen.

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zlib-ng

zlib replacement with optimizations for "next generation" systems.

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